Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1381 ATGTCTGGAGCTCCCCCGTCCGTGTTTCACCGTGCCTCAAGCTCCGTCGTCTCTCCATCTCATGAGTTCTGCCACCACCGAGTCTCTCCGTCTCTAGCGTCGCCGCCTTCGTCTGCCCAGTGTCGCGGCCGACCCGCCGTCCTCTTCTCCAAGCTCAGTGGTTTTGCTGTCGTCCTCTCTAGCCCTCCCCTTTGTGGAACGGCTGAACAATTCCTTCTTTGGTGGAAAAAAGTTTTCCACCATTCTGCTGAAAAGAAGGCTCAACTTGTTCTTTGTAACATGGCTGAGGAACTGGATAAGCCTCTGCTCGATCCCGAGAATTTCAACCGAGATGGTATTGATTTGGAGCGCATACCATTGGAAGAAGTATTTCAACAGTTGCGAACATCGCGAACTGGGCTTTCATCTGACGACGCTGAAGCCCGGCTGCAGATATTTGGCCCCAACAAACTTGAAGAGAGGAAAGAGAATAAAATACTGAAATTTCTAAGTTTTATGTGGAATCCTCTATCATGGGTTATGGAAGCTGCAGCATTGATGGCCATTATCCTTGCTAATGGGGGAGGGGAAGGTCCTGATTGGCAAGACTTTGTAGGAATTTTATGCCTTCTGGTAATAAACTCAACAATAAGTTTCATAGAAGAAAATAATGCTGGTAATGCTGCAGCAGCACTAATGGCTCGTTTAGCTCCTAAAACAAAGGTTCTAAGAGATGGGCTATGGCAAGAGCAAGATGCAGCTATATTAGTACCTGGAGACATAATCAGCATAAAGCTAGGAGATATCGTTCCAGCCGATGCTCGATTGCTCGAAGGGGACCCTCTAAAAATTGATCAGGCAAAATCAAGATGCTTTCTTATGCAGTCTGCGCTTACCGGAGAATCTCTACCTGTCACAAAGAGAACAGGTAATGAGGTATTTTCAGGTTCAACATGTAAGCAGGGAGAGATTGAAGCTGTAGTGATAGCAACAGGAGTTCATTCCTTTTTCGGAAAGGCAGCACATTTGGTAGATAGCACAGAAGTTGTTGGGCACTTTCAGAAGGTCCTTACTTCAATTGGTAACTTCTGCATTTGCTCTATAGCTATAGGGATGCTACTTGAAATAATCATAATGTTCCCAGTGGAGCATCGTTCATACAGGGATGGAATTAACAACCTTCTTGTTCTCTTGATTGGAGGAATACCCATTGCCATGCCTACAGTACTGTCTGTGACACTTGCAATCGGCTCTCATCGTCTTTCTCAGCAGCGTCTTTCTCAGCAGGGAGCCATCACAAAGAGAATGACAGCCATAGAAGAAATGGCTGGGATGGATGTCCTATGCAGTGATAAAACTGGAACTCTTACACTAAACCGGTTAACCGTTGATCGAAACCTTGTAGAGGTCTTTAACAGAAACATGGACAGAGATATGGTTATTCTATTAGCAGCCAGAGCATCCAGACTGGAAAACCAAGATGCCATTGACAGTGCCATTGTTAACATGCTAGCTGATCCAAAGGAGGCACGTGCAAACATTACTGAGCTTCATTTTCTACCTTTCAATCCAGTAGATAAACGCACAGCAATCACATATATTGATTCAGAGGGTAACTTTTACAGGGCCAGCAAAGGAGCACCCGAACAGATTCTAAATATGTGCCAAGAGAAAGACGAGATTGCTAGAAAAGTGCATGCAATCATTGACAAATTTGCTGAGAGGGGACTGCGATCTCTTGCAGTGGCTTATCAGGAAATTCCTGAAAAATTCACGGATGGTCCTGGAGGTCCATGGACATTTTGTGGTTTGTTGCCTCTTTTTGATCCTCCAAGACATGATAGTGCTGAGACCATCAGGAGAGCACTTAACCTGGGAGTCTGTGTTAAGATGATCACAGGGGATCAGTTGGCAATTGCAAAGGAGACTGGCAGAAGACTTGGTATGGGGACAAACATGTATCCTTCTTCATCTTTATTGGGACGTGAAAAAGATGAAAATGAAGCACTCCCAGTCGACGAGCTCATCGAAAAGGCAGATGGCTTTGCTGGTGTATTTCCTGAACATAAATATGAAATAGTGAAAATTTTGCAAGAAAAGAAGCATGTAGTTGGAATGACAGGAGATGGAGTGAATGATGCCCCAGCACTGAAGAAAGCAGATATTGGAATAGCTGTGTCAGATGCTACAGATGCTGCAAGAGGTGCTGCTGATCTGGTCTTAACTGAGCCTGGCTTAAGTGTGATCATCAGCGCCGTCTTAACTAGCCGAGCTATATTTCAGAGAATGAAAAATTATACAATATATGCTGTTTCCATCACAATAAGGATAGTGCTTGGTTTTGTGCTCCTAGCTTTGATTTGGGAGTTTGATTTCCCACCTTTCATGGTCCTTATTATTGCAATACTGAATGATGGTACGATCATGACCATATCGAAAGACCGAGTGAAGCCATCCCCTACACCTGATAGTTGGAAGCTGCCAGAGATATTTGCCACAGGAATTGTCATTGGCACATACCTTGCTTTGGTTACTGTCCTATTCTACTGGGCAGTAGTTGACACCACTTTCTTTGAGACTCACTTCCATGTAGCATCCTTATCCAGTGACAGTGAGAAAGTTGCATCTGCTGTATATCTGCAAGTTAGCATCATCAGCCAAGCTTTAATTTTCGTGACTCGCAGCCGCGGCTGGTCATTCCTAGAGAGACCAGGAGTTCTACTAATGTGTGCCTTTGTAATAGCTCAATTGGTAGCCACCTTGATTGCTGTCTATGCACACATCAGTTTTGCTTATATAAGAGGAATTGGATGGCAGTGGGCTGGTGTTATATGGTTATATAGTTTAGTGTTTTATGTGCCTTTGGACATCATTAAGTTCATAGTGCGCTATGCTTTGAGTGGAGAAGCCTGGAATCTGGTATTTGACAAGAAGACTGCTTTTACATCAAAGAAAGACTATGGAAAGGAAGACAGGGCTGCAAAGTGGGTTCTTTCTCAGAGGAGTCTGCAAGGACTCATGGCTGTGGACCTCGGAGCCAACGAGAGGAGCTCTTCTTGGATAGCTGAACAAGCCAGGCGCCGCGCCGAAATAGCCAGGCTGGGGGAATTGCACACTTTGAGAGGACATGTAGAGTCTGTTGTGAGACTCAAAAAGTTAGATTTGAAAATGATCCAATCAGCACACACAGTCTAA 3174 0.4455 MSGAPPSVFHRASSSVVSPSHEFCHHRVSPSLASPPSSAQCRGRPAVLFSKLSGFAVVLSSPPLCGTAEQFLLWWKKVFHHSAEKKAQLVLCNMAEELDKPLLDPENFNRDGIDLERIPLEEVFQQLRTSRTGLSSDDAEARLQIFGPNKLEERKENKILKFLSFMWNPLSWVMEAAALMAIILANGGGEGPDWQDFVGILCLLVINSTISFIEENNAGNAAAALMARLAPKTKVLRDGLWQEQDAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQAKSRCFLMQSALTGESLPVTKRTGNEVFSGSTCKQGEIEAVVIATGVHSFFGKAAHLVDSTEVVGHFQKVLTSIGNFCICSIAIGMLLEIIIMFPVEHRSYRDGINNLLVLLIGGIPIAMPTVLSVTLAIGSHRLSQQRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNRLTVDRNLVEVFNRNMDRDMVILLAARASRLENQDAIDSAIVNMLADPKEARANITELHFLPFNPVDKRTAITYIDSEGNFYRASKGAPEQILNMCQEKDEIARKVHAIIDKFAERGLRSLAVAYQEIPEKFTDGPGGPWTFCGLLPLFDPPRHDSAETIRRALNLGVCVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGREKDENEALPVDELIEKADGFAGVFPEHKYEIVKILQEKKHVVGMTGDGVNDAPALKKADIGIAVSDATDAARGAADLVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFVLLALIWEFDFPPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLPEIFATGIVIGTYLALVTVLFYWAVVDTTFFETHFHVASLSSDSEKVASAVYLQVSIISQALIFVTRSRGWSFLERPGVLLMCAFVIAQLVATLIAVYAHISFAYIRGIGWQWAGVIWLYSLVFYVPLDIIKFIVRYALSGEAWNLVFDKKTAFTSKKDYGKEDRAAKWVLSQRSLQGLMAVDLGANERSSSWIAEQARRRAEIARLGELHTLRGHVESVVRLKKLDLKMIQSAHTV* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1381 1057 ProSitePatterns E1-E2 ATPases phosphorylation site. 444 450 IPR018303 -
Amo16g1381 1057 Gene3D - 193 927 - -
Amo16g1381 1057 PRINTS H+-transporting ATPase (proton pump) signature 672 688 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo16g1381 1057 PRINTS H+-transporting ATPase (proton pump) signature 700 716 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo16g1381 1057 PRINTS H+-transporting ATPase (proton pump) signature 558 576 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo16g1381 1057 PRINTS H+-transporting ATPase (proton pump) signature 872 893 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo16g1381 1057 PRINTS H+-transporting ATPase (proton pump) signature 731 756 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo16g1381 1057 SUPERFAMILY Calcium ATPase, transmembrane domain M 113 959 IPR023298 -
Amo16g1381 1057 SUPERFAMILY Calcium ATPase, transduction domain A 231 337 IPR008250 -
Amo16g1381 1057 Pfam E1-E2 ATPase 229 416 - -
Amo16g1381 1057 Gene3D - 439 737 IPR023214 -
Amo16g1381 1057 SFLD Haloacid Dehalogenase 424 751 - -
Amo16g1381 1057 Gene3D - 1009 1057 - -
Amo16g1381 1057 Gene3D - 231 324 - -
Amo16g1381 1057 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 133 918 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo16g1381 1057 PANTHER ATPASE 10, PLASMA MEMBRANE-TYPE 94 1037 - -
Amo16g1381 1057 Pfam haloacid dehalogenase-like hydrolase 438 714 - -
Amo16g1381 1057 SMART Cation_ATPase_N_a_2 114 186 IPR004014 -
Amo16g1381 1057 CDD P-type_ATPase_H 133 953 IPR006534 GO:0008553|GO:0016021|GO:0120029
Amo16g1381 1057 PANTHER CALCIUM-TRANSPORTING ATPASE 94 1037 - -
Amo16g1381 1057 SFLD p-type atpase 424 751 IPR044492 -
Amo16g1381 1057 Gene3D - 454 601 IPR023299 GO:0000166
Amo16g1381 1057 PRINTS P-type cation-transporting ATPase superfamily signature 287 301 - -
Amo16g1381 1057 PRINTS P-type cation-transporting ATPase superfamily signature 723 735 - -
Amo16g1381 1057 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Amo16g1381 1057 PRINTS P-type cation-transporting ATPase superfamily signature 596 607 - -
Amo16g1381 1057 PRINTS P-type cation-transporting ATPase superfamily signature 700 719 - -
Amo16g1381 1057 PRINTS P-type cation-transporting ATPase superfamily signature 618 628 - -
Amo16g1381 1057 Pfam Cation transporter/ATPase, N-terminus 118 180 IPR004014 -
Amo16g1381 1057 SUPERFAMILY HAD-like 438 747 IPR036412 -
Amo16g1381 1057 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 675 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo16g1381 1057 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 200 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1381 Amo-Chr16 24204282 24214518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1381 94 1057 Primary Pumps ATPases AT1G17260 79.564 0.0 1535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1381 K01535 - zju:107404902 1653.65