Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1371 ATGTTCAGTTTCAGAGGCGTGGATCTCGATGCACTCTTGGACATGTCCACCGATGAAGTCGTTAAGCTCTTCACTATTCGTGCTCGCAGAAGGTTTCAGCGCGGTTTGACTCACAAGCCTATGGCACTCATCAAGAAGCTGCGTAAGGCGGTGAGTTTTCTATTTTATTTTAGTTTGAATGTTATTGATTTGTTATCTTTCTATATGATTGGCTTCGACTTTGATTATACCGTGCTAAGCATGAATAGTGTGATTGTTTTTTCTTGA 267 0.4082 MFSFRGVDLDALLDMSTDEVVKLFTIRARRRFQRGLTHKPMALIKKLRKAVSFLFYFSLNVIDLLSFYMIGFDFDYTVLSMNSVIVFS* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1371 88 PANTHER 40S RIBOSOMAL PROTEIN S15-6 2 53 - -
Amo16g1371 88 Gene3D 30s Ribosomal Protein S19; Chain A 1 60 IPR023575 GO:0003735|GO:0005840|GO:0006412
Amo16g1371 88 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 2 53 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1371 Amo-Chr16 23972485 23972826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1371 2 50 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 85.714 2.15e-23 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1371 K02958 - han:110930998 102.449