Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1352 ATGACCGGAAGGAGACTAAGGGAAGCAATCAACGGGATGTTCATGCAGCTTGAGAAGTTGATAAAATGTGATACATCGCAAGCAGCTTGTCCTGGAGGTATTTGCCCTGTTACCGTGGAAGTGATGAACCATGTTAACGCTGTTGGAGAGTTTGGGTCTTCTTGGCTTTCTGCGGAGGTAACTAGAATAATTGCAATGTTGGAAAGCCATCTGGAAGCTAAGTCCAAACATTACAGCAACCCTGCTTTGGGCTCTGTTTTCTTGATAAATAATGGGAGGTACATTGAAAAGAAGGCAAAACAGTACCAATTGGATAAGATTTTGGGCAATCATTGGATCCGACAAAGGACTGCTAAAGTCCGAGAAAACTGTGAACACTACAGAAGAAGCTCGTGGGAAGAGGTTTTAGGGTTTTTGAAACTTGGCATGCCTAACGTTGAAGAAGCAGAGTCAATGAAAAAGAAGCTCAATCTGTTCAACTTGCGGTTTAAGGAGATATGGATGGATCAGAGTGCATGGTTTATCCATGATGAAGAGCTAAAGGAAGAGATAATAATACCGCTGGGAAAGATCATGTCTCATACCTATGGATTGTTCATTTGGGGTTTCAAGAGCATGCTTGGTAGGGATGCTGACGAGTGTATCAAGTATTCAGTTTTAGACATTGAAGACCTTCTGAAGAATTTGTTTAGCTGGAGAGATGAATAA 708 0.4181 MTGRRLREAINGMFMQLEKLIKCDTSQAACPGGICPVTVEVMNHVNAVGEFGSSWLSAEVTRIIAMLESHLEAKSKHYSNPALGSVFLINNGRYIEKKAKQYQLDKILGNHWIRQRTAKVRENCEHYRRSSWEEVLGFLKLGMPNVEEAESMKKKLNLFNLRFKEIWMDQSAWFIHDEELKEEIIIPLGKIMSHTYGLFIWGFKSMLGRDADECIKYSVLDIEDLLKNLFSWRDE* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1352 235 Gene3D Exocyst complex component Exo70 1 235 - -
Amo16g1352 235 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 230 IPR004140 GO:0000145|GO:0006887
Amo16g1352 235 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 4 230 - -
Amo16g1352 235 SUPERFAMILY Cullin repeat-like 4 230 IPR016159 -
Amo16g1352 235 Pfam Exo70 exocyst complex subunit 51 227 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1352 Amo-Chr16 23698424 23699131 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1352 4 230 EXO70 exocyst subunit family AT5G58430 42.063 6.37e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1352 K07195 - aip:107607034 479.174