Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1307 CCGAACACCGGTGACATCGAAGCAGTTGATCCTGTAAGGTGTTTAGCAGGAAGATTGAAAGCAATACTACAATATGATCGCTTTAGATCTCTAATTCCGGCCAGAGCTAAAGCGAAATGCATTTCAAATGCTGGTTATTTCATTAATGTGATCGGCAAAGAATTTGCCTGCCTAGTGCACTTCAAGACTGAGCCCATGTCTATATTTCTTCCCAGAGAATGTGGTATCACAGTGAAGACACCAATTTTCTTTGTTAATGCAACATATGACTCATGGCAGGTGTTGATTTGTGTGTTCAGATACAGAAAATATTGGTACCGGGTGTTGGCCAAAACAACATTCGCAAAGGCTGTGGAATATTGGTATTATGAAAGAAGGCCATTCCATGAGATTAATCGCACTTACCCTTGCAACCCCACATGCCATAACCTTATCTTTGATAACAATCATCGCTCAGATGATTAG 465 0.4086 PNTGDIEAVDPVRCLAGRLKAILQYDRFRSLIPARAKAKCISNAGYFINVIGKEFACLVHFKTEPMSIFLPRECGITVKTPIFFVNATYDSWQVLICVFRYRKYWYRVLAKTTFAKAVEYWYYERRPFHEINRTYPCNPTCHNLIFDNNHRSDD* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1307 154 PANTHER NOTUM-RELATED 14 50 IPR004963 GO:0016787
Amo16g1307 154 PANTHER NOTUM-RELATED 108 149 IPR004963 GO:0016787
Amo16g1307 154 PANTHER PECTIN ACETYLESTERASE 14 50 - -
Amo16g1307 154 PANTHER PECTIN ACETYLESTERASE 108 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1307 Amo-Chr16 22766966 22769684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1307 3 94 Carbohydrate Esterase AT5G45280 32.414 9.17e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1307 K19882 - gmx:100781246 74.3294