Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1293 ATGACGCTCGTATTCTCCATCGGCATTCTATCCCTTCCGTTTTTTCCTAAGACAATTGTGGATATCTTTGCATTGATGTTGGAATCTGCCGGCAGAAAGCTTTCATTTTATAATACATACCCTTTGAAGGAAGCATCTGTTCTCTGTTGTGGGATTGGTGATATCTATGGAGAGTGTGGTGACTCACAGGTGGCTATGACAAGGAAGAGAAAGCGGCCAGAGCTTATGATCTCGCTGCTRTCAAYTACTGGGYTCCAACCACTACCACCAACTTTCCGGCACCACCAGCATGGGCGATGGCAGGCAAGAATAGGCAGAGTAGCCGGAAACAAAGACCTGTACCTTGGCACTTTAAGAATTTCACCTCCACAGTTTCTTCTTGGTAGGTATTATGGAACCCGTTTGAAGATATTGTGCCAAGAAATCTTCAGACTAAAGCTACACCTGATACAGTAA 456 0.4452 MTLVFSIGILSLPFFPKTIVDIFALMLESAGRKLSFYNTYPLKEASVLCCGIGDIYGECGDSQVAMTRKRKRPELMISLLSXTGXQPLPPTFRHHQHGRWQARIGRVAGNKDLYLGTLRISPPQFLLGRYYGTRLKILCQEIFRLKLHLIQ* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1293 151 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 92 117 - -
Amo16g1293 151 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR AIL5 92 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1293 Amo-Chr16 22200140 22201874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1293 93 118 AP2-EREBP Transcription Factor Family AT5G17430 96.154 8.65e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1293 K09285 - oeu:111387202 61.2326