Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1287 ATGGATTCTGATTCTGTGTTGGCATTGCCTGAGAGCAATGGATTCAAAACAAGGGACAGTCATGATTTTGAGGAAGACTTTGTAGAGAAAGATCCTACCGGCCGCTATCTTAGATACAATGAAATGTTGGGCAAGGGTGCTTTCAAGACTGTTTATAGGGGCTTTGATGAAGTTGACGGATTAGAAGTTGCTTGGAACCAAGTCAGGATTGATGAACTCCTGGGATCTGCAGATGACGTTGCYAAGTTGTACTCCGAAGTAAACCTATTGAAGTCTGTGAACCACGAAAACATCATTAAGTTCTATAATTCTTGGATTGATGATAAGAAGAAAACTGTTAACATTATTACTGAGCTCTTCACATCTGGAAACCTAAGACAATACCGGAAGAAGCARAGATATGTTGACATGAAAGCCATAAAAGGTTGGGCTCGACAAATTCTTCAAGGTCTGGTATATCTTCACGGTCACAAGCCGCCTATTATTCACAGAGACTTGAAATGTGARAACATCTTTGTAAATGGGAACCATGGAGAAGTCAAGATCGGAGATCTCGGTTTGGCAACTGTCATGCAGCAACCAACTGCTCGAAGTGTTATTGGTGCCATTWCTTTTCTTGAATATTGA 627 0.4051 MDSDSVLALPESNGFKTRDSHDFEEDFVEKDPTGRYLRYNEMLGKGAFKTVYRGFDEVDGLEVAWNQVRIDELLGSADDVAKLYSEVNLLKSVNHENIIKFYNSWIDDKKKTVNIITELFTSGNLRQYRKKQRYVDMKAIKGWARQILQGLVYLHGHKPPIIHRDLKCENIFVNGNHGEVKIGDLGLATVMQQPTARSVIGAIXFLEY* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1287 208 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Amo16g1287 208 SUPERFAMILY Protein kinase-like (PK-like) 31 205 IPR011009 -
Amo16g1287 208 PANTHER KINASE DOMAIN PROTEIN 5 206 - -
Amo16g1287 208 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Amo16g1287 208 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 5 206 - -
Amo16g1287 208 ProSiteProfiles Protein kinase domain profile. 37 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1287 208 Pfam Protein kinase domain 40 202 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1287 208 Gene3D Transferase(Phosphotransferase) domain 1 120 207 - -
Amo16g1287 208 SMART serkin_6 37 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1287 Amo-Chr16 22088476 22090240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1287 26 200 MAP Kinase Kinase Kinase AT3G18750 74.857 8.45e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo16g1287 Pkinase 2.2e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1287 K08867 - gmx:100809602 348.206