Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1272 ATGGCTGGTACACTTGTTGGTGGAGCTTTCCTCTCTGGCTTCATTAACGTCGTCTTTGACAGGTTCCTTACAACTGATGCTGTCAACTTGGTCTTGGGCAAGAAACTTGGCCCTGACTTGGTTCAAAGGCTGAAGACTGCTCTGTTGGGTGCTGAAGGTCTTGTTGCTGATGCTGAGATGAAGCAGTTTGGTAATTCATCTGTAAGGAAGTGGCTCGATAGTCTCCGGGATGCTGTTTACTGTGCTGAGGACTTGCTCGACACTGTCCTCGCCAAAGCCGCCACTCAAAAGGAGCTAAGTTCTTCCTGGTGGTCCCCTAGCTTCTTCATCAACCGAGATAGAGATGACATGGTAGACAAGATAGAAGGGGTGGTTACACGAATTGAGGATCTTGGAAAACAAAAAGATTTCCTTGGTCTTGAAAAGATTCCCACTGGTAGCTCATCATGGAGGACTCCATCCACTTCTCTTGTAAAAGGGAGTGTGTATGGCAGGGAGGATGACCAGAAGGCCTTAGTGCAGATGCTGAATGACAACAATGAGCATCACCTCTCTGTGATCGCTATTGTTGGCATAGGTGGGGTTGGTAAAACAACTTTAGCCCAATGGGTGTACAACAACAAGGAGTTTATGAAGGGATTTGATCTGAAAGCATGGGTTTGCGTTTCGGAGAAGTTTGAAGTTGTTGAGACTACAAGGAATGTCATAAAGCAGCTCCATGGAGGTTCTTGTAGTCTCGATGATTTCAATTCACTTCAACATACTTTGAAAGGAGAATTGTCCAATAAGAAGTTTTTCATTGTTCTTGATGATGTTTGGAGTGATGATGGTGACAAATGGAGTAATTTTATGACCCCTTTCCAACAAAATGGGAATAAGGGAAGTATTGCTCTTCTGACTACTCGGGAGGAAAATGTTGTTTCTGCAGTTCGAAATTGTCAGCCTTATTTTCTCAGGAAGTTGTCGGAGGACTATTGTTGGTCAGTGCTTGCAGAAAATGCATCTTTTCCACAGTCAAATGGGAGAGCAGCACTTGAAGAAATAGGAAGAAAGATTGTCAAAAAGTGTGATGGCTTGCCATTAGCTGCAGAAACACTTGGTCACTTGTTACGTACTAAGCATGATATTGAGGAATGGAACAAGATACTAATGAGTCATATTTGGGAATTTCCGGTGGAGAAGAGTAAGATTATTCCAGCATTACTGATAAGTTACTTCCATCTTTCTCCATATTTAAAGCGTTGTTTTGTTTATTGTGCTTTGTTTCCCAAGGATTTTCAATTTGAAAAAGATGGATTAATACTTTTGTGGATAGCAGAAGATCTTTTACCACCACCAAAGAGAGGAGAGAGTTTAGAAGAAGTTGGTTGTGAGTGTTTTGATGAACTTACTTCCAGATTATTTTTCACAGAGATTCAAGATGATGACGATCATTATTTTGTGATGCATGATCTGTTGCATGATTTAGCAATATTCCTTGCTGGAGATTTCTATTGCAACTCAGAAGAACTTGGAGAATTGATCCATCTACGCTACTTGGATCTCTCTTGCACTAATATTAAGACATTGCCAGAGTCTTTGTGTAAGTTGTGTAATTTGCAAACATTGAAGTTGAATCATTGTTCTAATCTAAGTATGCTGCCTAGTGGCTTGCATAATCTTGTGAGTTTGCGGCATCTTGATATTAGGAAAACTTTGGAAGAAATGCCCAGAAAAATGAGCAAATTGAATCAATTGCACGTTTTAAGTTTCTTTATCATGGGCAAGCACGAAGAGAATGGAATCCAAGAGTTAGGAGGGCTTGCAAATCTTCATGGATCCTTTGAGATTAAGAAATTGGAAAATATTGTGGATGTGAATGAAGCAAAGAGCGCAAAGGTGATGGATAAGAAGCACATTGATGAATTATGCTTGGAATGGTCTCCAAGTAATGATTTGGTTTCAAGCACACAAAAAGAAAGAGACATGCTCGATAACTTGCAAATGCACAGTGGGTTGAAAGAGCTGAAAATAAGGGATACAAGGCTGCCATCTCTTAAGTCCCTGTGCATTGAAGGTTTTGATCAGCTGAGGAGTATTGGCGGCGAGTTTTACAAGAATGAAGGAGATCATCATGCTTCACATATTGCACCATTTCCCTCACTAGAGACATTGGAATTTCATTATATGGCATGTTGGGAGGTGTGGCACGTATCTGAGTCGGAATCATTTCCTCAACTTAGGTGGCTTCAAATAAGAGAATGTCCAATGTTGAAGAAAGAGATGCTTAATCAGCACAACGGCATGTATCTTGATGGGGATAGTTTATCAATTGAGGGACGTGAATCTGTGAAGGAGTCTGCATTTAAGGCAATGATGAGCATCAACCATCTAACTTGCCTCCAAGAAATACACATCTGGAGGTGTAGCAAACTAGAATTCCCCCAGCTACAGCTGCAGAAGTATGATTTGGTAGAACTAAAAATACATTCCAGCTGTAATTCACTGACCTCGTTGTCATTGGAATTCTTTCCCAATCTCAAGAATCTGGAGATAGAAGGGTGTAGGAATCTGGAATCAGTGTCAATGTCAGAGGCACCACACGCTGCTCTTCAACGTCTCTCCATCAGTGGATGCTCCAAATTAGTGTCATTTGCAGGAGAAGGACTGGCTGCACCCAACTTGACTCATCTTCAAGTCACAAATTGTGAGAAGTTGGAGGCATTACCACGTGACATGAAGAGTCTACTCCCAAGTTTACAGTCTCTCGAGATATATGGTTGCCCAAACATTTGCAGGTTGCCAGAGGGTGGTTTGCCGCCTAACTTGAAATCACTTGAAGTGGAAATTGGCGAGCAACAGATGAGGGATCTATCATGGATGGGTAACTTGCACGCCCTCACTCATCTTACTATTGATGGGTGGAAGAACATAAAGTCATACCCAGAGGTGGGTTCGCTGCCTCACCTTCCCTCCCTTACCACTCTCAAGATATGCTGGTTCAAGAATCTGGAGACATTGGTCTGCAACTAG 3012 0.4187 MAGTLVGGAFLSGFINVVFDRFLTTDAVNLVLGKKLGPDLVQRLKTALLGAEGLVADAEMKQFGNSSVRKWLDSLRDAVYCAEDLLDTVLAKAATQKELSSSWWSPSFFINRDRDDMVDKIEGVVTRIEDLGKQKDFLGLEKIPTGSSSWRTPSTSLVKGSVYGREDDQKALVQMLNDNNEHHLSVIAIVGIGGVGKTTLAQWVYNNKEFMKGFDLKAWVCVSEKFEVVETTRNVIKQLHGGSCSLDDFNSLQHTLKGELSNKKFFIVLDDVWSDDGDKWSNFMTPFQQNGNKGSIALLTTREENVVSAVRNCQPYFLRKLSEDYCWSVLAENASFPQSNGRAALEEIGRKIVKKCDGLPLAAETLGHLLRTKHDIEEWNKILMSHIWEFPVEKSKIIPALLISYFHLSPYLKRCFVYCALFPKDFQFEKDGLILLWIAEDLLPPPKRGESLEEVGCECFDELTSRLFFTEIQDDDDHYFVMHDLLHDLAIFLAGDFYCNSEELGELIHLRYLDLSCTNIKTLPESLCKLCNLQTLKLNHCSNLSMLPSGLHNLVSLRHLDIRKTLEEMPRKMSKLNQLHVLSFFIMGKHEENGIQELGGLANLHGSFEIKKLENIVDVNEAKSAKVMDKKHIDELCLEWSPSNDLVSSTQKERDMLDNLQMHSGLKELKIRDTRLPSLKSLCIEGFDQLRSIGGEFYKNEGDHHASHIAPFPSLETLEFHYMACWEVWHVSESESFPQLRWLQIRECPMLKKEMLNQHNGMYLDGDSLSIEGRESVKESAFKAMMSINHLTCLQEIHIWRCSKLEFPQLQLQKYDLVELKIHSSCNSLTSLSLEFFPNLKNLEIEGCRNLESVSMSEAPHAALQRLSISGCSKLVSFAGEGLAAPNLTHLQVTNCEKLEALPRDMKSLLPSLQSLEIYGCPNICRLPEGGLPPNLKSLEVEIGEQQMRDLSWMGNLHALTHLTIDGWKNIKSYPEVGSLPHLPSLTTLKICWFKNLETLVCN* 1004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1272 1003 Gene3D - 153 315 IPR027417 -
Amo16g1272 1003 Gene3D - 320 403 IPR042197 -
Amo16g1272 1003 Gene3D - 404 491 IPR036388 -
Amo16g1272 1003 PANTHER OS05G0414200 PROTEIN 504 883 - -
Amo16g1272 1003 PANTHER OS05G0414200 PROTEIN 40 502 - -
Amo16g1272 1003 PANTHER DISEASE RESISTANCE PROTEIN RP 504 883 IPR044974 GO:0006952
Amo16g1272 1003 PANTHER DISEASE RESISTANCE PROTEIN RP 40 502 IPR044974 GO:0006952
Amo16g1272 1003 Gene3D - 21 130 - -
Amo16g1272 1003 SUPERFAMILY RNI-like 785 999 - -
Amo16g1272 1003 PRINTS Disease resistance protein signature 186 201 - -
Amo16g1272 1003 PRINTS Disease resistance protein signature 356 370 - -
Amo16g1272 1003 PRINTS Disease resistance protein signature 528 544 - -
Amo16g1272 1003 PRINTS Disease resistance protein signature 259 273 - -
Amo16g1272 1003 Pfam Rx N-terminal domain 39 98 IPR041118 -
Amo16g1272 1003 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 419 IPR027417 -
Amo16g1272 1003 Gene3D Ribonuclease Inhibitor 496 756 IPR032675 -
Amo16g1272 1003 SUPERFAMILY L domain-like 479 854 - -
Amo16g1272 1003 Gene3D Ribonuclease Inhibitor 757 1003 IPR032675 -
Amo16g1272 1003 Pfam NB-ARC domain 166 384 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1272 Amo-Chr16 21822131 21825547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1272 184 422 WRKY Transcription Factor Family AT5G45050 26.939 2.09e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1272 - - aip:107645700 1919.05