Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1271 ATGAAGGTTCCTTTTGAGCTAAGAAGTTTAAGGGATATTAAATGTTTAAATATATTGGTGGATACACAAGGATCTGTCAACCTTACTGATTTTGAACTGGCAAAGTATTATGTTGTTGTTATTGGTGATTACATGAAGGTCAGGGTGTTGTCCCAATGGTTGCACCATGAGGTTGCTGTTTTGAAATTGAAAAAGGAGGTATTAACTGGCTTGGTTAAATTGTAA 225 0.3511 MKVPFELRSLRDIKCLNILVDTQGSVNLTDFELAKYYVVVIGDYMKVRVLSQWLHHEVAVLKLKKEVLTGLVKL* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1271 74 Gene3D Transferase(Phosphotransferase) domain 1 11 71 - -
Amo16g1271 74 SUPERFAMILY Protein kinase-like (PK-like) 11 42 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1271 Amo-Chr16 21758727 21759754 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1271 11 58 MAP Kinase Kinase Kinase AT4G08500 47.917 3.12e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1271 - K16196 lgi:LOTGIDRAFT_204877 37.7354