Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1261 ATGGAGGCCCTCAATGCTGTTGGCTTGACCCCTTTATCTGTGCTTTCTGACACAAGAAAACAACCCAGAAAATTCTCTTCACTTGCTACAATTTCCGCGTGCAAAGTCTCAAACTTTTCCACTTCTAACAACACCCAACCTACTTTGCAACAGTGTTTATCCAAGGGTCTGATTCTTGCAGCTTCTGTTTTCAACACTGGACTTGCCGCTAGAGCTTTAACATATGAAGAGGCTTTGCAGCAATCAGTGAATGTTCCTTCTAGTTCTGGGGATTTTGATATCAACGGAGTTATAGATAGTGTTATCAGTTTTGGAACAGAGAATCCTGCTGTTATAGCTGGAGGAGTTCTGAAGAAGCCTAAGCCATGGGGAGTTGAATCTGCAAAGAATGCGTATGCAAAACTTGGTGCTGATGACAATGCTCAGTTGCTTGATATAAGAGCACCTTCAGAATTTAGGATTGAGGGTACACCGGATGTTGGAGGTTTGAGGAAGAAACAAGTTTCAATTGCTTACAATGGTGATGATAAGCCAAGATTCCTGCAGAAACTTTCTTTGAAGTTCAAGGATCCAGAGAATTCTACTCTGTTCATTCTGGACAAGTTTGATGGGAACGCCGAACTCGTTGCTGAGTTGGTCACTGCTAATGGATTTAAAGCTGCTTATGCAATCAAGGATGGTGCAGAAGGACCACGGGGATGGAAGAATAGTGGGCTTCCTTGGACACCACCAAAGAAAGGCTTGAGTTTGGATTTTGGCAATTTGGCAGAGGCTATTGGAGAGAGCTCTGATGGTTTGGCTGTTACTCTTGGGATTGCTGCAGCTACCGGACTCGGTGTATTAGCTTTTACCGAGATAGAAACAATTCTCCAACTTTTAGGATCAGCTGCAATTATTCAGTTTGCTAGCAGGAAGCTTCTATATGCTGAGGATCGAAAGCGAACACTACAACAGATCGATGAGTTCTTGAACACCAAGATTGCCCCTAAGGAGCTTGGTGATGAAATAAAGCAAATTGGAAAGGCTCTTCTACCGACTTCCACCAACAATAAGGTTCTTCCTGCACCAACGGAACAAACCTCCGAGCCTACTACATCAGATACGACTGTACAGAAAGCAGAAGCTACTCCTGACACTATATCTGAGTCCAAAGTAGATGCAGTAGCAGCCCCTGCTCCGGAAATAAATTCGGCCGAAGTTAAGGCACAATCAGTTCCAGGGACTCCAACACCCCTTTCACCATACACCAGTTATCCTGATTTGAAGCCTCCAACATCTCCCACCCCTTCACAGCCCAATTTACAGAAAGCAGAAGCTACTCCTCCGGACACTATATCCGAGTCCAAAGTAGAAGCAGTAGCAGCACCTGCTCCTGAAATAAATTCGGCCGAAATCAAGGCACAAGCACCTCCAGCAACACCAAGACCCCTTTCACCATACCCAAGCTATCCTGATTTCAAGCCTCCAACATCTCCTAGCCCTTCACAGCCCTAG 1494 0.4511 MEALNAVGLTPLSVLSDTRKQPRKFSSLATISACKVSNFSTSNNTQPTLQQCLSKGLILAASVFNTGLAARALTYEEALQQSVNVPSSSGDFDINGVIDSVISFGTENPAVIAGGVLKKPKPWGVESAKNAYAKLGADDNAQLLDIRAPSEFRIEGTPDVGGLRKKQVSIAYNGDDKPRFLQKLSLKFKDPENSTLFILDKFDGNAELVAELVTANGFKAAYAIKDGAEGPRGWKNSGLPWTPPKKGLSLDFGNLAEAIGESSDGLAVTLGIAAATGLGVLAFTEIETILQLLGSAAIIQFASRKLLYAEDRKRTLQQIDEFLNTKIAPKELGDEIKQIGKALLPTSTNNKVLPAPTEQTSEPTTSDTTVQKAEATPDTISESKVDAVAAPAPEINSAEVKAQSVPGTPTPLSPYTSYPDLKPPTSPTPSQPNLQKAEATPPDTISESKVEAVAAPAPEINSAEIKAQAPPATPRPLSPYPSYPDFKPPTSPSPSQP* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1261 497 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 432 - -
Amo16g1261 497 MobiDBLite consensus disorder prediction 347 497 - -
Amo16g1261 497 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 438 497 IPR044240 -
Amo16g1261 497 Gene3D - 123 252 IPR036873 -
Amo16g1261 497 MobiDBLite consensus disorder prediction 347 378 - -
Amo16g1261 497 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 125 243 IPR036873 -
Amo16g1261 497 MobiDBLite consensus disorder prediction 472 497 - -
Amo16g1261 497 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 432 IPR044240 -
Amo16g1261 497 MobiDBLite consensus disorder prediction 412 430 - -
Amo16g1261 497 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 438 497 - -
Amo16g1261 497 ProSiteProfiles Rhodanese domain profile. 137 243 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1261 Amo-Chr16 21559084 21562340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1261 1 422 Sulfurtransferasese or Rhodanese AT4G01050 55.172 6.86e-143 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1261 K17525 - qsu:112036501 562.762