Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1212 ACCTCTGCTTGTGACGAAACTGTGACAGGTGGAAGCTATTCAATATTTTACTCATTCAAGCTCAAGTTTTGGTTGTTATCAAGGCATAAAATTATGTCTACATACGGGGATGATGTTAAGAATGATTCTGATAATGATTTGGGTGATGATTTTATTTATGAACCGAATTCACATGATGATGTTGAAGATGATGATGTTGATTCGTTAGATTTTACTAACAAGAGTGAACATGATTGTGATGTTAAAAGAATATCAGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACAGAGGATGAAGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGGCTTTGTAATGAGAAAGGATGACATCGTTAGTGATAGGGAAAGTAAAATCATTTGTAGGCAACTTGTTTGCAATAAAGAGGACTGCAGGAATATGAGATATCTTGATCTGGAGAATAGATCATGGGAGGCAAGGTCAATCACACGAATTAAGTGCCCAGCACGGCTTAAGGTTAAGGTTGACTACGGTTGTGGTAGATAG 543 0.372 TSACDETVTGGSYSIFYSFKLKFWLLSRHKIMSTYGDDVKNDSDNDLGDDFIYEPNSHDDVEDDDVDSLDFTNKSEHDCDVKRISDLMVEDIWNLEFRTEDEACQFYNAYACWHGFVMRKDDIVSDRESKIICRQLVCNKEDCRNMRYLDLENRSWEARSITRIKCPARLKVKVDYGCGR* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1212 180 Pfam FAR1 DNA-binding domain 105 175 IPR004330 -
Amo16g1212 180 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 40 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1212 Amo-Chr16 20683520 20684461 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1212 FAR1 9.7e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1212 - - aip:107646409 311.997