Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1185 ATGGCCAACCGATGGTGGACCGATCCGGTTGGTCTGCCCGGAGTAGACAACTCCACCAACTCTCCGATCAAGAAACCCGATCTGGGTTTCTCCATGAACACCCAACCTGCATCTGCTCCCATCGACAAGCACGAAGAACAAGACGACAACAACAGCGACGACTACCCCAAGGAAGGAGCAATCGAGCTCTCCGCCACGCGCCGCCCAAGGGGCCGTCCTCCTGGCTCCAAGAACAAGCCCAAGCCGCCGATATTCGTCACCAGAGACAGCCCTAACGCTCTCAGAAGCCACGTCATGGAGGTTGCTAACGGTGCTGACATCACCGATAGCTTGGTTCAGTTCGCAAGGAAGCGCCAGAGAGGGGTCTGCGTTCTCAGCGCCACCGGAACAGTCGCCAACGTCACTCTCCGGCAGCCAACTGCTCCCGGCGCCGTCATGGCACTCCATGGGCGTTTTGAGATCATATCTTTAACAGGCTCGTTTCTTCCCGGGCCGTCGCCGGCGGGGTCGACGGGGCTGACAGTGTACCTGGCTGGAGGGCAGGGGCAGGTGGTGGGCGGCGGGGTGGTGGGCCCTCTTGTGGCGTCGGGATCAGTTATGATAATGGCGGCTACGTTTTCGAATGCAGTTTATGAGAGATTGCCAATTGAGCAGGATGAGGATCAACTTCAAGAAGTGCCTCCTGCTGCAAACGGCGGTGGCTCTCCGCCGGTGTTAGGTGGTTCCGGCGGGGACGGTTATATGGTTGGGCAGCTCAACCATGAAGGTTCTTGGGGTCATTCGAGACCACCGCCACCCCCCTATTGA 807 0.5911 MANRWWTDPVGLPGVDNSTNSPIKKPDLGFSMNTQPASAPIDKHEEQDDNNSDDYPKEGAIELSATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGADITDSLVQFARKRQRGVCVLSATGTVANVTLRQPTAPGAVMALHGRFEIISLTGSFLPGPSPAGSTGLTVYLAGGQGQVVGGGVVGPLVASGSVMIMAATFSNAVYERLPIEQDEDQLQEVPPAANGGGSPPVLGGSGGDGYMVGQLNHEGSWGHSRPPPPPY* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1185 268 MobiDBLite consensus disorder prediction 41 65 - -
Amo16g1185 268 MobiDBLite consensus disorder prediction 1 89 - -
Amo16g1185 268 MobiDBLite consensus disorder prediction 225 268 - -
Amo16g1185 268 CDD DUF296 95 178 IPR005175 -
Amo16g1185 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 220 - -
Amo16g1185 268 Gene3D - 94 225 - -
Amo16g1185 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 95 208 IPR005175 -
Amo16g1185 268 MobiDBLite consensus disorder prediction 13 40 - -
Amo16g1185 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 8 247 - -
Amo16g1185 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 247 IPR014476 GO:0003680
Amo16g1185 268 ProSiteProfiles PPC domain profile profile. 91 229 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1185 Amo-Chr16 20049700 20050956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1185 1 264 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 56.229 5.22e-88 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1185 - - aprc:113863548 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1185 16 20049700 20050956 Amo16g1185 16 20049700 20050956 ECH