Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1183 ATGGAAGAATTTCACTATAAATTTCGACATCTTTCTCAGCGAGGTAATGCCTCCCGATTATTGGATTTTATAGAGAATTCCGAGACGAACGCATGGCCGCTGACGGCTCGTCAATCGGAACACCTTTATATCCTAATACTCCTTTCTCACGTCACTATAATTCTAGAGCCACCAAATTCACCATGCTTCCGCAGCTTTACAGATGAGGAAGCTGTTTATCGATTCTACAAGACTTATGCAATGATGCACGGTTTCGCTGTGAGGTTGGATGAAGTCAGACGCGATAGCGATGGTTCCGTAATTATACGCCAAATTGTTTGCAATCGGGCGGGCTCAAGAAAGGAAGAGGTTGAAAAGGACGAAAGAATCAGGGACCACCGACCCCTAACTCGAAGTTGTTGCCGGGCGAGAATTCGTGCAAGACTAGATACAAAAATTCAGAAATGGAAGGTTGTTTCGTTATACGAAGAGCACTCTCATGAATTAGTTGATCCACTCGACGTTAGCATGATGCCTGAGTTTCGCACATTCAGTGTATCGGATAAAGATCAGGGAAAGAATTTGCACGACATAGGCATCAGGACC 585 0.4444 MEEFHYKFRHLSQRGNASRLLDFIENSETNAWPLTARQSEHLYILILLSHVTIILEPPNSPCFRSFTDEEAVYRFYKTYAMMHGFAVRLDEVRRDSDGSVIIRQIVCNRAGSRKEEVEKDERIRDHRPLTRSCCRARIRARLDTKIQKWKVVSLYEEHSHELVDPLDVSMMPEFRTFSVSDKDQGKNLHDIGIRT 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1183 195 Pfam FAR1 DNA-binding domain 74 163 IPR004330 -
Amo16g1183 195 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 66 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1183 Amo-Chr16 20025066 20031160 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1183 FAR1 4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1183 - - aip:110268388 245.743