Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1181 ATGGCTCCTCCACCACCCAATGGTTATCGTCACGAAACGATGATTGACATAAAGAACAGCAACAAGACCGCTCAACAAACAGTGGGTTCCAGCGGCGGTCTGGAGTTCTGGAACCTCACCTACACCGTGAGCAAGAAGTTGAAGGTGGAGGAGAAGTGGTCGAATGAAGACGTGGACTTACTCCACGATATCAGTGGCTATGCACCGAAGGGGTGCATCACGGCGGTGATGGGGCCCAGTGGTGCGGGAAAGTCAACGTTCTTGGACGGACTTGCTGGGAGGATCAAGAGTGGGAGCCTGAAAGGAAGGATTTCATTGGATGGTGCAAGTGTGAGTGCAAGCTTGATCAAGAGAACTTGTGCATATATCATGCAGGACGATAGGCTTTTTCCTATGCTCACTGTTTATGAGACTTTGATGTTTGCTGCTGATTTTCGATTGGGGCCTCTCTCGCTTGCTGATAAAAGGCACAGAGTCGATAACTTGATAGATCAACTTGGCTTATCGACATCCAGGAACACGTACATAGGAGACGAAGGAACAAGAGGAGTTTCGGGTGGAGAGCGGCGGAGAGTGTCAATAGGAGTGAACATCATCCACGGTCCGTCCCTTCTCTTCCTAGACGAGCCAACCTCCGGGCTGGACTCCACAAGCGCACACAATGTGATCGAAAAGGTTCACGACATTGCACGCAGCGGCAGCACCGTCATCCTCACCATCCACCAACCCTCTTCAAGAATCCAAATGCTCCTCGACCATCTCATCATTCTCGCCAGGGGCCAGCTCATGTACCAAGGCTCACCTAATGACGTCACGCAACATTTGACTCGCATGTCCCGCAGGGTACCAAAGGGTGAGAACCCTATCGAACATCTCATTGACGTGATCCAAGAATACGATCAATGTGAGGTTGGAGTGGAGGCGCTTGCTGAGTTTGCACGCACTGGAATGAAGCCCCCTCTGTTGAAGGAGGGTGTGTCTGTCGAGCCGTCGCCGTCGCTCGTGAGGGCACGGCATGGGCGTGGGTATGAGGAGAAGTCGTTGGAGGTATCTGGGACATCTCAAGTGAGTAGGAGAGTTGCGGATGAGTATGGTCACAGTTTGAGGAGTCCGTACAACAAGAATTCGCAGTCGTGGAGCAGTAGTCACAGCGCTATGTTTCTCAAGTTCACTCCTTCACGACTCAGGAATAAAGAGTCCAAGCCACACAATAATCCTGCAAGGCATGGTTCCTCACCAGGGTACTACACATACTCAAGTGAGATCCTGGCAGCGACACCAACCCCTCACAGCAGTGACTACACTGTGAACGAAAACGACTATCTCACCCCAACAACCGGCGCTGCCACGCCAGAGCACCTGGCTCCAAAATTCGCCAACTCCTTCCTCTCGGAAACCTGGATCCTGATGCGGCGCAACTTCATCAACATCCGAAGAACCCCAGAGCTGTTCCTGTCACGCCTCATGGTACTCACCATCATGGGCTTCATGATGGCCACAATAGAAACCTCTCACAATGCCTACAGAGCCTCTTCCTACACCATCGCCGGCTTAATCACTCACATGCCTTTTCTTCTCCTCCAAGCTTCCGTTTACGCTGCCATTGTTTGGTTTGCCCTAACCCTAAGAGGTCCTTTCTACTACTTCCTCATCGTCCTCTTCGTCTCGCTTCTCTCCACCAACTCCTTCGTCGTCTTCATCAGCTCCGTTGTTCCCAACTATATACTAGGTTACGCCGCTGTCATTGCTTTCACTGCCTTGTTCTTCTTGTTTTGTGGATACTTCTTGAGCAGCCATGATATACCGGTTTATTGGCGGTGGATGAACAAAATTTCCACCATGACTTACCCTTATGAAGGGCTACTAATGAACCAGTATCAGACAAACATTACTTTTGGACACAACAATAGCATCAACATAACTGGTTTTGGAATCTTGAATAATCTTCACATTGGGACTGAGGAGTATAAGAAGTGGGAGAATGTGGGAATCATGTTAGGTTGGGCTGTGTTATATAGGCTTTTGTTTTACTTGAATGGTTTTGAGTAG 2049 0.4988 MAPPPPNGYRHETMIDIKNSNKTAQQTVGSSGGLEFWNLTYTVSKKLKVEEKWSNEDVDLLHDISGYAPKGCITAVMGPSGAGKSTFLDGLAGRIKSGSLKGRISLDGASVSASLIKRTCAYIMQDDRLFPMLTVYETLMFAADFRLGPLSLADKRHRVDNLIDQLGLSTSRNTYIGDEGTRGVSGGERRRVSIGVNIIHGPSLLFLDEPTSGLDSTSAHNVIEKVHDIARSGSTVILTIHQPSSRIQMLLDHLIILARGQLMYQGSPNDVTQHLTRMSRRVPKGENPIEHLIDVIQEYDQCEVGVEALAEFARTGMKPPLLKEGVSVEPSPSLVRARHGRGYEEKSLEVSGTSQVSRRVADEYGHSLRSPYNKNSQSWSSSHSAMFLKFTPSRLRNKESKPHNNPARHGSSPGYYTYSSEILAATPTPHSSDYTVNENDYLTPTTGAATPEHLAPKFANSFLSETWILMRRNFINIRRTPELFLSRLMVLTIMGFMMATIETSHNAYRASSYTIAGLITHMPFLLLQASVYAAIVWFALTLRGPFYYFLIVLFVSLLSTNSFVVFISSVVPNYILGYAAVIAFTALFFLFCGYFLSSHDIPVYWRWMNKISTMTYPYEGLLMNQYQTNITFGHNNSINITGFGILNNLHIGTEEYKKWENVGIMLGWAVLYRLLFYLNGFE* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1181 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 278 IPR027417 -
Amo16g1181 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 10 501 - -
Amo16g1181 682 MobiDBLite consensus disorder prediction 332 354 - -
Amo16g1181 682 Pfam ABC-2 type transporter 503 626 IPR013525 GO:0016020|GO:0140359
Amo16g1181 682 SMART AAA_5 70 269 IPR003593 -
Amo16g1181 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 502 678 - -
Amo16g1181 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 501 - -
Amo16g1181 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 19 502 678 - -
Amo16g1181 682 Pfam ABC-2 type transporter 241 298 IPR043926 GO:0140359
Amo16g1181 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 34 284 IPR003439 GO:0005524
Amo16g1181 682 Pfam ABC transporter 61 212 IPR003439 GO:0005524
Amo16g1181 682 ProSitePatterns ABC transporters family signature. 184 198 IPR017871 GO:0005524
Amo16g1181 682 Gene3D - 42 313 IPR027417 -
Amo16g1181 682 CDD ABCG_EPDR 34 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1181 Amo-Chr16 20014031 20017028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1181 54 357 Calmodulin-binding Proteins AT2G36910 24.675 4.03e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1181 K05681 - gmx:100804809 958.362