Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1171 ATGTGTGAAGCCTTGCAGAGACGATACCAATTGCTGGAGGAGATTGGTCGTGGTAGATTCGGCACTGTGTTTCGCTGCTTCGACCCTAACTCCGGTGAGTTTCTCGCATGCAAGGTTATCGATAAGGGTCTTCTTCTTGACCCCACCGATCGTGCCTGCATCGAAAACGAATCCAAGTTCATGACTTTTCTTTCCCCACACCCTAACATTGTTAAGATTTTCGGAGCCTATGAGGATTCCGATTCTCTCTCCATCGTCGCTGAGCTTTGCGAACAAGAAACCCTATTCGACCGAATTGCTGATCGACCTTTGCCGGAGATAGAGGCCGCCGCCGTAATGAAACAGCTTCTTGAGGCGGTGGCGCATTGCCACAGGCTGGGGATAGCACACAGGGACATAAAACCAGATAATTTGCTTTTCGATAGAAGGGGGAATCTGAAAGTTGCGGACTTTGGTTCGGCGGAGTGGTTCGGCGACGGAAGAGGGATGAGTGGGGTGGTGGGGACGCCGTATTACGTGGCGCCGGAGGTGGTGATGGGRAGGGAATACAGTGAGAAAGTTGATGTTTGGAGCTCCGWTGTGATTCTTTACATAATGTTGGGTGCTATTCCACCATTCTATGGAGAGAATGCTTCTGAGATTTTTGAAGCTGTTGTTAGGGCTAATCTTAGATTCCCAACTACCATCTTTAGGTCTGTTTCTTCTTCTGCTAAGGATCTTCTCAGAAAGATGATTTGCAAGGAYCCTTCAAGGAGAATTTCAGCAGAGCAAGCATTAAGGCATCCATGGATCTTGAGTGGAGGAGGTGTGACTAGTGATCTGAACTGA 828 0.4843 MCEALQRRYQLLEEIGRGRFGTVFRCFDPNSGEFLACKVIDKGLLLDPTDRACIENESKFMTFLSPHPNIVKIFGAYEDSDSLSIVAELCEQETLFDRIADRPLPEIEAAAVMKQLLEAVAHCHRLGIAHRDIKPDNLLFDRRGNLKVADFGSAEWFGDGRGMSGVVGTPYYVAPEVVMGREYSEKVDVWSSXVILYIMLGAIPPFYGENASEIFEAVVRANLRFPTTIFRSVSSSAKDLLRKMICKDPSRRISAEQALRHPWILSGGGVTSDLN* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1171 275 SUPERFAMILY Protein kinase-like (PK-like) 7 266 IPR011009 -
Amo16g1171 275 Gene3D Transferase(Phosphotransferase) domain 1 2 273 - -
Amo16g1171 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 271 - -
Amo16g1171 275 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Amo16g1171 275 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 271 - -
Amo16g1171 275 CDD STKc_CAMK 8 263 - -
Amo16g1171 275 Pfam Protein kinase domain 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1171 275 PIRSF ILK 4 260 - -
Amo16g1171 275 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1171 275 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1171 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1171 Amo-Chr16 19884852 19886124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1171 3 267 EF-hand Containing Proteins AT4G04720 43.123 5.56e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Amo16g1171 Pkinase 4.3e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1171 - K08794 gmx:548089 416.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1171 16 19884852 19886124 Amo16g1171 16 19884852 19886124 ECH