Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1164 ATGACTCCTTTAAGGACTCCTCAGAGAACACCAGTCGGTAAGGGCGATGATATCATGATGGAAGCTGAAAATCTGGCTAGGTTGAGGGAGTCTCAGACACCATTATTAGGAGGAGAGAACCCAGAGTTGCATCCTTCAGAATTTTCCGGAGTCACTCCTAAGAAAAAGGAAATTCAGATTCCCTCTGCAACTCCTGGAGATGCAGGCCTTACTCCTAGAAGTGGTTTGACTCCAGAAAGGGATGGGTATTCTTTCAGCATGACTCCAAAGGGAACTCCTCTCAGAATTCCTCTCAGGGATGAACTACATATTAATGAGGGCATGGATATGTGTGAAACTGCAAAACATGAGTTAGCTGATATGAAACGAAGTTTGCGCTCAGGTTTAAGCAGCTTCCCCTACTGA 405 0.4519 MTPLRTPQRTPVGKGDDIMMEAENLARLRESQTPLLGGENPELHPSEFSGVTPKKKEIQIPSATPGDAGLTPRSGLTPERDGYSFSMTPKGTPLRIPLRDELHINEGMDMCETAKHELADMKRSLRSGLSSFPY* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1164 134 MobiDBLite consensus disorder prediction 31 94 - -
Amo16g1164 134 PANTHER - 1 133 - -
Amo16g1164 134 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 133 - -
Amo16g1164 134 Pfam pre-mRNA splicing factor component 72 133 IPR021786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1164 Amo-Chr16 19781512 19783388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1164 1 133 MYB-Related Transcription Factor Family AT1G09770 71.831 6.52e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1164 K12860 - gmx:100790369 207.223