Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1156 ATGGGTAGTGAAACTTGCAAGTGGATTTATTTTCAGAGGATGGATAAGCTGATGTCCTCTCCAGCGCAGCAATCAAGTCTCTCATGCGGTTTGGACTCCGGAGAATATGTGTTTACGAATCCTCGAGTTTATTTGAACCGCGCAAATGGGTTTGATCAGATGAGGGATAGTCCTGGGAATTCTGAATCCTTTGGCGAACAAGGTTCAAATGGACATAAACATAAGAAAAGAAGGTATGCGAGGTACAGCGACGATGATGCATCCTCATTCAGATTGCTTGCTAATTCCATTCAGAAATTCGGTGAGATATATGAGAAGATTGAGAACAGTAGAAGGCAACAGATGGTGGAACTGGAAAAGATGAGGATGGAGTTCCATAAGGATCTTGAAACACAAAAGAGCCAGATCCTAGAGAGAGTTCAGAGTGAAATTTCAAAACTACATCAGAGAGATGATGATGAGGAGGAGAATGATGAGTAG 480 0.4208 MGSETCKWIYFQRMDKLMSSPAQQSSLSCGLDSGEYVFTNPRVYLNRANGFDQMRDSPGNSESFGEQGSNGHKHKKRRYARYSDDDASSFRLLANSIQKFGEIYEKIENSRRQQMVELEKMRMEFHKDLETQKSQILERVQSEISKLHQRDDDEEENDE* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1156 159 MobiDBLite consensus disorder prediction 50 82 - -
Amo16g1156 159 PANTHER OS01G0718900 PROTEIN 3 155 - -
Amo16g1156 159 Coils Coil 104 124 - -
Amo16g1156 159 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Amo16g1156 159 MobiDBLite consensus disorder prediction 53 67 - -
Amo16g1156 159 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 3 155 IPR044823 -
Amo16g1156 159 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1156 Amo-Chr16 19701997 19702476 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1156 84 149 Trihelix Transcription Factor Family AT3G14180 46.970 7.84e-13 63.2