Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1137 ATGGAAAGGGTGTTCTCAGTTGATGAAATATCGGAGCCATTTATTCTGCCGGCGGCGAAGAAGATGGATGAGTTGACGGCGAAGTCAACGATGAATCGCAGCGCTTCAGAGTGGGCGTTCCAACGGTTTCTGCAAGAAGCTTCTTCGGCAGTATCAGCAACAGTGGCGTCGCCGTGTTCTTCGTCGTCTTCTGTGGTTGAGATCAAACAGGACCTCTCCCAAAACATGGAAACCAAGCCTCTTCAAAACGGCACCACCGTTGCCGTTTTGCCCAATGCCACTGCTTCTTCTTCTTCTTCTTCTGTCGCCGTTGATTCAGAGGATTACCAAGCTATCCTTAAGACCAAGCTCAAGCTCGCTTGCGCCGCCGTTGCTTTGACCAGGGGATCTTTGGTAAAATCTCAAGTTCCTGCCTCATTTTCTGAATGTACATCACAGGCAACTAATCTTTCTCAAGTTGCATCTCATGCTACTTTAAAAGGATCTGGCCCTTCTGGAAATGATTCATCTAAAGTACAAAATAAAGATGCCAAAGTACCAGTGGGGATTCCTTCCTTATCTGGTGTGCAAAATAAGCCTGCTGTTGCAATCAGATCAACCACAAGTGGATCATCTAAAGACCAGTCAGATGATGAGGAAGCTGAGGAAGAGATTAATATGACTGAAAACATGGACCCTACTGATGCAAAACGAGTAAGGAGGATGCTTTCTAACAGAGAGTCTGCAAGACGCTCAAGACGAAGAAAGCAGGCTCATTTAACCGAGCTTGAGACACAGGTTTCTCAATTAAGAGGTGAAAATTCATCGTTGTTAAAGCGTCTAACAGATATTAGCCACAAATACAATGATGCTGCTGTTGACAACAGAGTATTAAAAGCCGATGTTGAAACCTTAAGAGCAAAGGTAAAGATGGCTGAAGAAACTGTCAAAAGAATTACTGGGTTGAATCCAATGTTTCCAGCCATGGCTGATTTATCATCAATCAGATTGCCATCATTTGATGGAAGCCCTTCTGAGACATCAACTGATGCAGCAGTTCCTGTTCAAGAAGACACGAATCGTCACTTCTTTCAACGCACTTCAAACAATCCTATGTCGAGCCATGATCATGGAGTCAACAATTGGTTGGCAGACGTATCTTCAGACGAAAATGTGCAGCATAACACTACCGCATCGACTGGTGGGAACAAGATGGACCGAACATCTTCCTTGCCAAGGGTGGCTAGCTTGGAACATCTTCAGAAGCGAATCCGTGGCAATGCAGATTCATCTGCTCCTGTTTCTAATGGAAAGCACCAATAA 1302 0.4478 MERVFSVDEISEPFILPAAKKMDELTAKSTMNRSASEWAFQRFLQEASSAVSATVASPCSSSSSVVEIKQDLSQNMETKPLQNGTTVAVLPNATASSSSSSVAVDSEDYQAILKTKLKLACAAVALTRGSLVKSQVPASFSECTSQATNLSQVASHATLKGSGPSGNDSSKVQNKDAKVPVGIPSLSGVQNKPAVAIRSTTSGSSKDQSDDEEAEEEINMTENMDPTDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRGENSSLLKRLTDISHKYNDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPMFPAMADLSSIRLPSFDGSPSETSTDAAVPVQEDTNRHFFQRTSNNPMSSHDHGVNNWLADVSSDENVQHNTTASTGGNKMDRTSSLPRVASLEHLQKRIRGNADSSAPVSNGKHQ* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1137 433 PANTHER BZIP TRANSCRIPTION FACTOR 1 413 - -
Amo16g1137 433 MobiDBLite consensus disorder prediction 181 251 - -
Amo16g1137 433 PANTHER BASIC LEUCINE ZIPPER 63 1 413 - -
Amo16g1137 433 Pfam Basic leucine-zipper C terminal 297 420 IPR020983 -
Amo16g1137 433 Pfam bZIP transcription factor 229 280 IPR004827 GO:0003700|GO:0006355
Amo16g1137 433 SMART brlzneu 226 290 IPR004827 GO:0003700|GO:0006355
Amo16g1137 433 MobiDBLite consensus disorder prediction 223 239 - -
Amo16g1137 433 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 282 IPR004827 GO:0003700|GO:0006355
Amo16g1137 433 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 233 248 IPR004827 GO:0003700|GO:0006355
Amo16g1137 433 Coils Coil 288 308 - -
Amo16g1137 433 Coils Coil 239 273 - -
Amo16g1137 433 Gene3D - 229 283 - -
Amo16g1137 433 SUPERFAMILY Leucine zipper domain 230 280 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1137 Amo-Chr16 19101861 19105100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1137 1 319 bZIP Transcription Factor Family AT4G02640 40.419 7.12e-50 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo16g1137 bZIP_C 3.1e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1137 K25784 - gmx:100170702 452.21