LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo16g1132	ATGGGAGACGAGACGAGTCCTGAGTGGATGAACAAGGGAGACAATGCATGGCAGCTGATGGCGGCAACAATGGTGGGGATGCAAACAATTCCAGGGCTAGTAATCTTGTACGGAAGCATGGTGAGCAGGTCATGGGCCATCAACTCGGCCTTCATGGCCTTATACGCTTTCTCCGCCGTGTTCGTTTGTTGGGCCAGCTGGGCTTACCGCATGTCGTTCGGCGAAGAATGGGTGTTTTTCTTGGGCAAGCCGGCGGTGGCGTTGGACGAGAAATTCCTTCTAGGGAAGTCGTTTCTGGGAGCGTTCCCTACTGCAACGATGGTGTTCTTTCAAGGAGTATTTGCGGCCATTACTCTGGTTCTTATTGGCGGTTCATTGCTTGGAAGAATGAACTTCCGTGCATGGATGCTGTTTGTTCCTCTCTGGCTTACATTTTCATACACGATCACTGCTTTCAGTATTTGGAGCCCGAATGGGTGGTTATTTAAGCTTGGAGTTATTGACTTTGCTGGTGGCCTTGTTATTCATGTCTCTGCTGGTGTTGCTGGCATTACCGCAGCTTTTTGGGTGGGTCCAAGATCAGAGAAGGAAAGAGAAGCATTTGCTTCAAATAATATGATTGTAGCATTGGGAGGTGCGGGCTTGGTTTGGATGGGGTGGTCAGGCTTCAACGGCGGTGCTCCGCTTGCTGTGAACACACTTGCATCTCTCGCAATTCTAAACACTCATGTCTGCGCTGCTACTAGCATCATCACATGGCTCGTCCTCGACACTTTATGTTTCGGTAAGCCAACCATGTTTGGCGCCATTCAAGGCTTGATCACCGGCCTTGTTTGCATTACACCCGCCGCAGGAATAGTGCAAGGTTGGGCAGCAATTTTGATGGGTTTGTTCTCAGGAAGTGTACCCTGGTACACATTGATGGTGCTTCACAAGAAGTTCGAATTCTTAAACAAAATAGATGATCCAATGGCCATTTTTCACACACATGCCATAACCGGAATTCTTGGTGGAATTCTAACAGGCTTATTTGCTGTTCCTAAATTGTGTCGCCTCTTCTATGGAGTGCCTGATTGGAAGAAATACACTGGACTCTTTTATGGCCTTAAAAATGGTTTAGCCCATGCTGGTTTGACTCAGTTGGGGATCCAACTTGAAGCCACTATTTTTGTAGTTGTATTTAATGTTATTAGTACAACCGTGATATGCTTGGTTGTGAGGAGCATAGTGCCATTAAGGGTTGATGATGAGGATGCATTGCAAGTAGGTGGTGACAAAAGCATGCATGGAGAAGAGGCATTTGCCTTGTGGTGTTCCCATCAGGATAAGGATACCAAGTTTGAGAATGTAAAGCAAAACAAAGTTTATGACACAAAAGATTTTTCGTCCTCCATTGACGAATCATCAACCAAGAAGGCTTCTAGTGAAGTTCAAATGGTTTGA	1443	0.4636	MGDETSPEWMNKGDNAWQLMAATMVGMQTIPGLVILYGSMVSRSWAINSAFMALYAFSAVFVCWASWAYRMSFGEEWVFFLGKPAVALDEKFLLGKSFLGAFPTATMVFFQGVFAAITLVLIGGSLLGRMNFRAWMLFVPLWLTFSYTITAFSIWSPNGWLFKLGVIDFAGGLVIHVSAGVAGITAAFWVGPRSEKEREAFASNNMIVALGGAGLVWMGWSGFNGGAPLAVNTLASLAILNTHVCAATSIITWLVLDTLCFGKPTMFGAIQGLITGLVCITPAAGIVQGWAAILMGLFSGSVPWYTLMVLHKKFEFLNKIDDPMAIFHTHAITGILGGILTGLFAVPKLCRLFYGVPDWKKYTGLFYGLKNGLAHAGLTQLGIQLEATIFVVVFNVISTTVICLVVRSIVPLRVDDEDALQVGGDKSMHGEEAFALWCSHQDKDTKFENVKQNKVYDTKDFSSSIDESSTKKASSEVQMV*	481

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo16g1132	480	Gene3D	Ammonium transporter AmtB like domains	2	454	IPR029020	-
	Amo16g1132	480	Pfam	Ammonium Transporter Family	17	434	IPR024041	GO:0008519\|GO:0016020\|GO:0072488
	Amo16g1132	480	TIGRFAM	amt: ammonium transporter	14	433	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Amo16g1132	480	PANTHER	AMMONIUM TRANSPORTER	2	479	-	-
	Amo16g1132	480	SUPERFAMILY	Ammonium transporter	9	414	-	-
	Amo16g1132	480	PANTHER	AMMONIUM TRANSPORTER MEP2	2	479	IPR001905	GO:0008519\|GO:0016020\|GO:0072488
	Amo16g1132	480	PRINTS	Rhesus blood group protein signature	111	127	IPR002229	GO:0005887
	Amo16g1132	480	PRINTS	Rhesus blood group protein signature	207	225	IPR002229	GO:0005887
	Amo16g1132	480	PRINTS	Rhesus blood group protein signature	238	260	IPR002229	GO:0005887
	Amo16g1132	480	PRINTS	Rhesus blood group protein signature	331	347	IPR002229	GO:0005887
	Amo16g1132	480	ProSitePatterns	Ammonium transporters signature.	168	193	IPR018047	GO:0008519\|GO:0016020\|GO:0072488

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo16g1132	Amo-Chr16	19005113	19007634	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo16g1132	105	452	Inorganic Solute Cotransporters	AT2G38290	53.161	1.07e-122	360

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo16g1132	K03320		-	gmx:100782944	725.317