Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1108 ATGTCGAATTTGGATCTCTCAAAAATTTCTCTGCGGCCATTCAAGCTAAGCGATGTTGACGACTTTTTGCTATGGGCTGGGGATGATCAAGTCACACAAAACTTAAGATGGAAGACTTGTGGTTCAAGGGAAGAGGCTTTGGCCTTCATAAGAGACGTGTGCATACCTCATCCRTGGCGACGCTCAATCTGCCTTGACGACCGTTCCATAGGCTTTGTTTCGGTGTATCCGTGGTCAGGTGATGATAGATGCAAGGCTGACATAGGCTATGCCGTGGCCGCAGACTACTGGGGCCAAGGCATAGCCACCAAAGCAGTGAAGATGGCTGTGCCTCAAGTGTTCAATGACTTGTCTCATCTGGTAAGATTGCAGGCTTTCACTTCCCCTGAGAACAAGGCTTCTCAGAGAGTACTGGAAAAGGCTGGGTTCCTTAAGGAGGGTCTGCTCAGAAAGTACACTTATTTTAAAGGGAACATTAAGGATTCGGTAGTGTTTAGTTTCTTGTCAACTGATGAATTTCCTCATGATGACTCGTGGAAATAA 543 0.4641 MSNLDLSKISLRPFKLSDVDDFLLWAGDDQVTQNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDDRSIGFVSVYPWSGDDRCKADIGYAVAADYWGQGIATKAVKMAVPQVFNDLSHLVRLQAFTSPENKASQRVLEKAGFLKEGLLRKYTYFKGNIKDSVVFSFLSTDEFPHDDSWK* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1108 180 Pfam Acetyltransferase (GNAT) domain 9 143 IPR000182 GO:0016407
Amo16g1108 180 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 8 168 IPR016181 -
Amo16g1108 180 CDD NAT_SF 63 110 - -
Amo16g1108 180 Gene3D - 2 176 - -
Amo16g1108 180 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 5 174 - -
Amo16g1108 180 PANTHER ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN 5 174 - -
Amo16g1108 180 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 160 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1108 Amo-Chr16 18272052 18272981 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo16g1108 Acetyltransf_3 1.8e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1108 - - gmx:100527210 304.293