Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1106 ATGGTTTCATCATCATCTCCCTCTRTAGTGTTTACAGTGAAASGGTGCGAACCAGAGCTAGTGKCTCCGGCCTCGCCCACTCCCCATGAAGTTAAACAACTATCAGACATAGATGATCAAGAAGGGCTACGTTACCAACTTCCAATCATAAATATATATCGTCACAATCCATCAATAGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCRTTTGCCGGTAGGCTTAGGGAGGGTCATGGCGGCAAGTTGATGGTTGATTGCACTGCAGAGGGTGTATTGTTCATTGAGGCCGATGCTGACGTGCCACTTGATCAACTTGGTGAAGCTCTTCAACCTCCATTCCCTTGCTATAAGGAATTGCTTTACAATGTTCCTGGCTCAGATGGAATTGTCGGCTGTCCCCTTCTACTCTTACAGGTCACACGCTTTAAGTGCGGCGGTTTTTCTGTCGGCATACGGGTGAACCACACGATGGTAGATGCAACTGGTATTGTGCAATTCATGAACGCCATGGCTGAAATCTCTCGAGGWTCTCATCAACCTTCCATTCTACCCGTTTGGTGTAGGGAGCTTCTAACTGCAAGAGACCCGCCACGCATCACATGCAACCATCGAGAATTTGAGGAAGCAAAAGATATTAAGGAATGGGAAACCATTATTGATGACAAAAACATGATTAAACGAAATTTCTTCTTTGGACCCACTGAAATAGCTTCTCTTCGCTGCTTGACTCTAAATCAATCCGCTGAATRYACTGGATTTGAGCTYATCACTGCATGCCTCTGGTATTGTCTTGTAAAAGCATTGCAACTACCACCAGAAAAAGAAGTTCGAATGTATTGTGTCGTCAATGCTCGTGCTAGATTTAACCCTCCCATGCCAATCGGTTATTATGGAAACGYTATATCRTTTCCGGCGGCGGTCTCCACCGTAGAGAAGCTATGTGAAAATCCATTTGAATATATTGTRAAGTTAATAAAAAAAGCGAAAGCCGAGMCAACAGAAGAATACATGCATTCTTTAGCAGATTTAATGGTGATTAAGGGACGACCTTTGACTACAAGAGCATGGTCTTTTCTTGTGTCAAAGGTGACACGTATTGGGTTTAGAAAAGTGGATTTTGGGTGGGGAAATGCAGTGTATGGTGGGATAAGTGGCGACAAGATTTTTGGAGAACTCACTCTCATGGATTGTGAGAATGCAAATGGAGAAGAAGGTGTTATAGTTCCACTTTACTTGCCTGCCAATGCTATGAAGAGGTTTGCAAAAGAAATGGATGATTTGCTTCTGATCCCAAATCAGAATTGCAAATAA 1347 0.4269 MVSSSSPSXVFTVKXCEPELVXPASPTPHEVKQLSDIDDQEGLRYQLPIINIYRHNPSIEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGGKLMVDCTAEGVLFIEADADVPLDQLGEALQPPFPCYKELLYNVPGSDGIVGCPLLLLQVTRFKCGGFSVGIRVNHTMVDATGIVQFMNAMAEISRGSHQPSILPVWCRELLTARDPPRITCNHREFEEAKDIKEWETIIDDKNMIKRNFFFGPTEIASLRCLTLNQSAEXTGFELITACLWYCLVKALQLPPEKEVRMYCVVNARARFNPPMPIGYYGNXISFPAAVSTVEKLCENPFEYIVKLIKKAKAEXTEEYMHSLADLMVIKGRPLTTRAWSFLVSKVTRIGFRKVDFGWGNAVYGGISGDKIFGELTLMDCENANGEEGVIVPLYLPANAMKRFAKEMDDLLLIPNQNCK* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1106 448 Gene3D - 218 436 IPR023213 -
Amo16g1106 448 Pfam Transferase family 13 438 - -
Amo16g1106 448 Gene3D - 12 217 IPR023213 -
Amo16g1106 448 PANTHER ALCOHOL ACYLTRANSFERASE 12 440 - -
Amo16g1106 448 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1106 Amo-Chr16 18232961 18234905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1106 20 434 Monolignol Biosynthesis Gene Families AT5G48930 28.372 3.39e-49 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1106 K19861 - gmx:100787907 552.747