Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1100 ATGCCCACTCCCCGCGAACTTAAACTGCTATCAGACATTGATGATCAAGAAGGGTTTCGTTTCCAACTTCCAAGCATATTTATATACGGTCACAATCCATCAATGGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCATTTGCCGGTAGGCTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACTGCAGAGGGTGTCTTGTTCATCGAGGCTGATGCTGACGTGGCACTTGACCAACTTGGTGACTCCCTTCAACCTCCGTTCCCTTGTTTTGAAGAACTCCTTTACAATGTTCCAGGATCGGAAGGAATTGTCAACTGTCCCCTTCTACTCATACAGGTGACACGCTTTAAATGTGGTGGTTTCACCCTTGCCTTCCGCCTAAACCACACCATGAGTGATGGCACTGGTTTTGCACAATTTATGACTGCCATGGCTGAAATGGCTCGTGGTGCACATCAACCTTCCATTCTACCTGTGTGGTCCAGGGAGCTCTTGAGTGCAAGGCACCCACCTCGCATTACATGCACCCATCGCGAATACGAAGAACCCATAGTAGACACCTCCACCATTATTCTGAGCAAGAAAGACATGGTTCAACGCTCCTTCTTCTTTGGACCAACCGAAATAGCTTCCCTTCGTCGTTTGGTTCCACGTCACCTCGGCGAATGCACTAGATTTGAGCTTGTAACTGCATGTCTATGGTGTTGCCGTACAAAAGCATTGCAACTTGCGCCAGAAGATGATGTTCGCATGATGTGCATCGTGAATGCACGCGCTAGGTTTAACCCTAAAATACCCCTTGGTTATTACGGAAACGTTTTTGCTTATCCTGCAGCAGTTACAACTGTAAGGAAGCTTTGTGAAAATCCGTTTGGATATGCGGTAGAGTTGATAAAGAAAGCAAAAGATGAAGTGACGGAAGAGTACATGCATTCTGTGGCAGATCTGTTGGTGACAAAAGGAAGACCGTTATTTACAACCGTAGGATCTTGCATTGTGTCAAACTTGACACGTGCTGGGTTAAGAGAAGTGGATTTTGGATGGGGTAATGCATTGTACGGTGGAGTATTTGAAGGTGGGGCTGGGGATTTTTTTGGAGTAACGTTTATGATGGATTGTGTGAATGGCAAAGGAGAAGAAAGTGTAATGTTTCCAATTTTCTTGCCGGTCAAAGCTATGGAGAGGTTTGAGAAAGAGTTGGCTGATATGCTTTGTAAGAGTTGTGATGATGGATATCCTACATTTATCAGATCTTCCTTGTAG 1305 0.4536 MPTPRELKLLSDIDDQEGFRFQLPSIFIYGHNPSMEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGRKLMVDCTAEGVLFIEADADVALDQLGDSLQPPFPCFEELLYNVPGSEGIVNCPLLLIQVTRFKCGGFTLAFRLNHTMSDGTGFAQFMTAMAEMARGAHQPSILPVWSRELLSARHPPRITCTHREYEEPIVDTSTIILSKKDMVQRSFFFGPTEIASLRRLVPRHLGECTRFELVTACLWCCRTKALQLAPEDDVRMMCIVNARARFNPKIPLGYYGNVFAYPAAVTTVRKLCENPFGYAVELIKKAKDEVTEEYMHSVADLLVTKGRPLFTTVGSCIVSNLTRAGLREVDFGWGNALYGGVFEGGAGDFFGVTFMMDCVNGKGEESVMFPIFLPVKAMERFEKELADMLCKSCDDGYPTFIRSSL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1100 434 Pfam Transferase family 9 415 - -
Amo16g1100 434 Gene3D - 201 414 IPR023213 -
Amo16g1100 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 2 420 - -
Amo16g1100 434 Gene3D - 1 196 IPR023213 -
Amo16g1100 434 PANTHER ALCOHOL ACYLTRANSFERASE 2 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1100 Amo-Chr16 18070601 18072911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1100 20 414 Monolignol Biosynthesis Gene Families AT5G48930 28.922 1.06e-44 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1100 K19861 - gmx:100787907 599.742