Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1096 ATGGCATCGGAGCAACACGACACCGCTCCAATTTCAACCCCCACTGCCAACGCGGCCACCACCGTGGTCGTTGCCCTCGAAGGCAGCTCCTCCGATCCGAAACGGCAGCAACAAATCGAGGAGAAGAAGCCGCTCGACGATTCACGGAGGCTGTTCCAGCGGCTGTGGACGGACGAGGATGAGATCGAGCTTCTGCAAGGGTTTCTCGAGTACACATCGCAGCGAGGTTCCTCTCACCACAACGACACTGCTTTGTTCTACGACCAAATTAAGTCGAAGCTTCAGCTGGATTTCAACAAGAACCAGCTTGTGGAGAAGATCCGGAGGTTGAAGAAGAAGTACCGCAACGTTCTCAACAAGATTGGTTCCGGCAAGGAATTCAACTTTAAGAGCGCTCACGATCAAGCCACCTTCGAGATTTCACGCAAGATCTGGAGCAACTTGGGTCCACGATCACGGCCGCGATCATCCGCTGCGACGACGGTGAAAATCGAAGAGAGGCGCGAGTCATTGGATGGATCGGCGTCACATAAAGAGCATAACTTTAATCTCAACGCTGCCGCTACAGGTCTCCCTGCAACGCCAAACAATAACTGTGAGAGTAACAAGTGTAGCGGTGGATATGGCATACCGGGTTTGGTTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGTTGGTGAAGGAATTGGTGGGTGGCGCTGCCATGGGAGGTGGTCACTTTGGCGGAAGAGGGTTTGGAGGTGGAGGCTTTTCACTGAACCCCATTCCATTGGGGTTCGGAGCGATGAATAATTTGGGTTTGGGTTTGGGTGGTGGGGAACTAGTGGATGAGAGATGGAGGAAGCAGCAAATATTGGAATTGGAAGTGTACTCCAAGAGGCTGGAACTGGTTCAGGAACAGATCAAAGCTGCTCTCGAGGAATTGCATAGGGCTTTGAAGCTGTTCTTGAATTTTGTGTCGGCTGTTATGTTACTGCCGGCACAGACAAACCTGAAAAAGTTTGGGAGAATTGTAGATAACGAACTTTTTGGAAAGTTCCAACAGAAGTATGGAAAGAGGTGTAAAGAAAGGTCTGCTGGGAGGTGTTGGAAGACAAGGCTTATCATTTGTTTAACAACGCAACAGGTTGGGTCGTCTTATTCTTCTAATGTGACGCTTGTTTATGATCGACCCTTATTCACATCACCTATTACATGCATTGAGATTTCGGAATTGATGATTTATCATAAGCAAAAATGGAAGTGGGAGAAAGAACATGCAGCAATCGGTTGA 1272 0.4921 MASEQHDTAPISTPTANAATTVVVALEGSSSDPKRQQQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLEYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFNFKSAHDQATFEISRKIWSNLGPRSRPRSSAATTVKIEERRESLDGSASHKEHNFNLNAAATGLPATPNNNCESNKCSGGYGIPGLVEETVRSCLSPLVKELVGGAAMGGGHFGGRGFGGGGFSLNPIPLGFGAMNNLGLGLGGGELVDERWRKQQILELEVYSKRLELVQEQIKAALEELHRALKLFLNFVSAVMLLPAQTNLKKFGRIVDNELFGKFQQKYGKRCKERSAGRCWKTRLIICLTTQQVGSSYSSNVTLVYDRPLFTSPITCIEISELMIYHKQKWKWEKEHAAIG* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1096 423 Pfam Protein of unknown function, DUF573 52 146 IPR007592 GO:0006355
Amo16g1096 423 PANTHER BNAANNG10740D PROTEIN-RELATED 11 309 IPR007592 GO:0006355
Amo16g1096 423 MobiDBLite consensus disorder prediction 149 178 - -
Amo16g1096 423 MobiDBLite consensus disorder prediction 160 176 - -
Amo16g1096 423 Coils Coil 100 120 - -
Amo16g1096 423 Coils Coil 287 314 - -
Amo16g1096 423 PANTHER BNAANNG10740D PROTEIN 11 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1096 Amo-Chr16 17962297 17972483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1096 1 149 GeBP Transcription Factor Family AT3G04930 63.855 1.71e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Amo16g1096 DUF573 3.3e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1096 - - gmx:100790030 340.117