Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1027 ATGGCCTTCTCTGCAATTGCATCTTCATTCACACTGCTTCTTCTCATTCTCATATTACTATTCTTCTTCGTAAATTTACCATCTTCTCCTTCTCTCTTCTCCACCTCCACCGCCACCGTCACCACACGCAGGTCTCTTCTAACCACCACGTGTTCCGCTGACGAGGGATCCAATGGCGGGATCCTCAACTACCTCTACATCCACAACTGCCTATTCCGCCGCAACGCCCTCCTCTCCATCCCCGCCCTCTCGATGCTCCTCCTCCTCCAATTCTACATCCTCATCAAGACCGCGCAGCACCACTTCTCCGTCGTCACCACCAAGCTTGCCTCTCACCTCAACCTCTCCCCCTCCATGGCCGCCGTCACCCTCCTAGCACTCGGCAACGGCTCCCCCGACGTTTTCTCCTCCCTCGCCGCCCTTCGCTCCGGGCAGTACCGCACCGGATTCGGCGCCATCCTCTCTGCCGGTACCTTCGTCTCCGCCCTCGTTGTCGGATTCGTCGCCATCTACGCCGCTCCGTTCTCCCTCGATCCCGCGCCCTTCGTCAGAGACGTGCTCTTCTACTTGACGGCAGCGATGTTCCTCTTCTACGTGTATCTTAGCGCCGAGATCTTCCTGTGGCAGGCGATTGGATTCGTAGGGTTTTATGCATTCTTCGTTGGTCTCGTGTTCTATATGGACTTGGGACTAGTTGATGGCAGAGGCAAGAGTGGGAATTCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCCGACGCCAAGGTTTCGGGATCTATGAACGACGAGAAGCGCAGTTCTGGATTCCCGGGAGCTTATGGATTGATTTCTAAAGCATGGGAGATTCCTGTTGCAACTCTCTTAAAACTGTCGATCCCCGAGCCAGCGCCGTCWCAATGGAGCAGACTTTACTCGTCGGCCAACATCGCYCTTTGTCCGATAKCCCTCTTRTATGCCTGCAAATCATTTGTGCCATTTGATCATCCCATAGCTTTCCTCCTCCCCAACACTGACTTGCCCCTCTGGTCAGTGGTGCTCACCACAAGCTTCTGCCTTGCATGCCTTCATTTAGTAATGGAAAAAGAACCTCCCAAAACCGAGCAAATACCTGTGGTTGTCATGGCATTTGTTATGAGCGTGTTTTGGATATCTACCACAGCTGGAGAACTGGTGAACTGCCTTGAAACTTTAGGTCTAGTTCTCAAACTACCACCAGCAATCCTCGGTCTCACGGTGCTGGCATGGGGAAATTCAGTGGGGGATCTCGTTGCCGATGTTGCGGTAGCTAAAGCCGGTCATCCGGCTATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTAGGTCTTGGAACAGCTCTGGTGATTCAGACGGCAAATATTCACCCTAAAGCCTATGTGCTTAATTTCCACGTAGGTATCGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCCGAGTGCCTAGGTTTTGGGGGTTTTGTCTCGTCGGCCTCTATGTTGTTTTTGTAGCAGTGAGTTTGATGGTGGCCATGTTTTCAGGGTGA 1608 0.5199 MAFSAIASSFTLLLLILILLFFFVNLPSSPSLFSTSTATVTTRRSLLTTTCSADEGSNGGILNYLYIHNCLFRRNALLSIPALSMLLLLQFYILIKTAQHHFSVVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRSGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSLDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAIGFVGFYAFFVGLVFYMDLGLVDGRGKSGNSSTDLEEQKELVAVHVDSDAKVSGSMNDEKRSSGFPGAYGLISKAWEIPVATLLKLSIPEPAPSQWSRLYSSANIALCPIXLLYACKSFVPFDHPIAFLLPNTDLPLWSVVLTTSFCLACLHLVMEKEPPKTEQIPVVVMAFVMSVFWISTTAGELVNCLETLGLVLKLPPAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIHPKAYVLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYVVFVAVSLMVAMFSG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1027 535 Pfam Sodium/calcium exchanger protein 379 528 IPR004837 GO:0016021|GO:0055085
Amo16g1027 535 Pfam Sodium/calcium exchanger protein 84 224 IPR004837 GO:0016021|GO:0055085
Amo16g1027 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 281 534 - -
Amo16g1027 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 48 244 - -
Amo16g1027 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 281 534 - -
Amo16g1027 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 48 244 - -
Amo16g1027 535 Gene3D - 115 244 IPR044880 -
Amo16g1027 535 Gene3D - 310 530 IPR044880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1027 Amo-Chr16 16677267 16679603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1027 4 534 Antiporters AT1G08960 65.996 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1027 K13754 - gmx:100775437 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1027 16 16677267 16679603 Amo16g1027 16 16677267 16679603 ECH