Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1021 ATGGCCTTCTCTGCAATTGCATCTTCATTCACACTGCTTCTTCTCATTCTCATATTACTATTCTTCTTCGTAAATTTACCATCTTCTCCTTCTCTCTTCTCCACCTCCACCGCCACCGTCACCACACGCAGGTCCCTTCTAACCACCACGTGTTCCGCTGACGAGGGATCCAATGGCGGGATCCTCAACTACCTCTACATCCACAACTGCATATTCCGCCGCAACGCCCTCCTCTCCATCCCCGCCCTCTCGATGCTCCTCCTCCTCCAATTCTACATCCTCATCAAGACCGCCCAGCACCACTTCTCCGTCGTCACCACCAAGCTTGCCTCTCACCTCAACCTCTCCCCCTCCATGGCCGCCGTCACCCTCCTAGCACTCGGCAACGGCTCTCCCGACGTCTTCTCCTCCCTCGCCGCCCTCCGCTCCGGCCAGTACCGCACCGGATTCGGCGCCATCCTCTCCGCCGGTACCTTCGTCTCCGCCCTCGTTGTCGGATTCGTCGCCATCTACGCTGCTCCGTTCTCCCTCGACCCCGCGCCCTTCGTCAGAGACGTGCTCTTCTACTTGACGGCAGCGATGTTCCTCTTCTACGTGTATCTTAGCGCCGAGATCTTCCTGTGGCAGGCGATTGGATTCGTAGGGTTTTATGCATTCTTCGTTGGTCTCGTGTTCTATATGGACTTGGGAGTAGTTGATGGCAGAGGCAAGAGTGGGAATTCTTCCACAGATCTTGAGGAGCAGAAGGAATTAGTTGCGGTGCACGTTGACTCCGACGCCAAGGTTTCGGGATCTATGAACGACGAGAAGCGCAGTTCTGGATTCCTGGGAGCTTATGGATTGATTTCTAAAGCATGGGAGATTCCTGTTGCCACTCTCTTAAAACTGTCGATCCCCGAGCCAGCGCCGTCGCAATGGAGCAGACTTTACTCGTCGGCCAACATCGCTCTTTGTCCGATATCCCTCTTATATGCCTGCAAATCATTTGTGCCATTTGATCATCCCATAGCTTTCCTCCTCCCCAACACTGACTTGCCCCTCTGGTCAGTGGTGCTCACCACAAGCTTCTGCCTTGCATGCCTTCATTTTGTAATGGAAAAAGAACCTCCCAAAACCGAGCAAATACCTGTGGTTGTCATGGCGTTTGTTATGAGCGTGTTTTGGATATCTACCACAGCTGGAGAACTGGTGAACTGCCTTGAAACTCTAGGTCTAGTTCTCAAACTACCACCGGCAATCCTCGGTCTCACGGTGCTGGCATGGGGAAATTCAGTGGGGGATCTCGTCGCCGATGTTGCGGTAGCTAAAGCCGGTCATCCGGCTATGGCAATGGCTGGATGCTTTGCTGGACCAATGTTTAACATGCTTGTAGGTCTTGGAACAGCTCTGGTGATTCAGACGGCAAATATTCACCCTAAAGCCTATGTGCTTAATTTCCACGTAGGTATCGTGATTGCATTTGTGTTCCTGCTTTTAAGCCTTATGGGGTCTCTCTTAGTGATCACTTGGTGCAGATTCCGAGTGCCTAGGTTTTGGGGGTTTTGTCTCGTCGGCCTCTATGTTGTTTTTGTAGCAGTGAGTATGATGGTGGCCATGTTTTCAGGGTGA 1608 0.5243 MAFSAIASSFTLLLLILILLFFFVNLPSSPSLFSTSTATVTTRRSLLTTTCSADEGSNGGILNYLYIHNCIFRRNALLSIPALSMLLLLQFYILIKTAQHHFSVVTTKLASHLNLSPSMAAVTLLALGNGSPDVFSSLAALRSGQYRTGFGAILSAGTFVSALVVGFVAIYAAPFSLDPAPFVRDVLFYLTAAMFLFYVYLSAEIFLWQAIGFVGFYAFFVGLVFYMDLGVVDGRGKSGNSSTDLEEQKELVAVHVDSDAKVSGSMNDEKRSSGFLGAYGLISKAWEIPVATLLKLSIPEPAPSQWSRLYSSANIALCPISLLYACKSFVPFDHPIAFLLPNTDLPLWSVVLTTSFCLACLHFVMEKEPPKTEQIPVVVMAFVMSVFWISTTAGELVNCLETLGLVLKLPPAILGLTVLAWGNSVGDLVADVAVAKAGHPAMAMAGCFAGPMFNMLVGLGTALVIQTANIHPKAYVLNFHVGIVIAFVFLLLSLMGSLLVITWCRFRVPRFWGFCLVGLYVVFVAVSMMVAMFSG* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1021 535 Gene3D - 310 531 IPR044880 -
Amo16g1021 535 Gene3D - 115 244 IPR044880 -
Amo16g1021 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 279 534 - -
Amo16g1021 535 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 48 244 - -
Amo16g1021 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 279 534 - -
Amo16g1021 535 PANTHER MITOCHONDRIAL SODIUM/CALCIUM EXCHANGER PROTEIN 48 244 - -
Amo16g1021 535 Pfam Sodium/calcium exchanger protein 379 528 IPR004837 GO:0016021|GO:0055085
Amo16g1021 535 Pfam Sodium/calcium exchanger protein 84 224 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1021 Amo-Chr16 16533227 16535870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1021 4 534 Antiporters AT1G08960 66.179 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1021 K13754 - gmx:100775437 739.569