Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0985 ATGGGTAATGGAACTTCTCGCGTTTTTAGCTGTTTGGTGCCATATAACGGCAAGAATGGGGTTGATTTGGAGTTTTTGGAGCCATTAGATGAAGGTTTAGGCCACTCYTTTTGTTATGTKAGGCCATCCATTTTTGAATCTCCTGCTATTACCCCATCAAATTCTGAGAGGTTTACACTAGATTCTAGCACCCTTGATTCGGAGACATTGAGTGGGTCATTTAGGAATGATGGCATTGAAGATTCTTCTGCCACACACAAGCCAGGGAAGAACTTACCTGARACCACATTCAAAACAATCTCAGGGGCTTCGGTCAGTGCCAATGTTTCAACTGCCAGGACCGGTAACCAGAATGCACTACTTGCTAGTAATTTYCTAGAACCTGCTGCRTCGTTTGAGGGAACTGCCTCATTTGCTGCAATCCCTTTGCAGCCTGTTCCCCGTGGCTCTGGACCTTTGAATGGCTTCATGTCTGGACCTTTGGAGAGGGGTTTTGCCTCTGGTCCTTTGGATAAGGGTGGTGGYTTCATGTCTGGGCCMATGGAGAAGGGGGTTATGTCTGGTCCTCTTGATGCCACTGACAAATCCAACTTCTCCGCACCACTTGCTCGTGGTCGCCGAAGGCCGCACCTCCACCGCCTGATGAGAAGTGTAAGTGGACCTATGAGAAACTCTCTTTCTCGGACTTTCTCTAAGCATTCGATGGGTGGTAGTTGGATGCAACGGTTATTCCTTCACCCYGTGACTCAACTAGCTTGGAATTCCAAAGAGGCAAAGTTTCGGCCTGAAGTCTCAAGAGATTGTGTTGAATTTGAGTATAAACAAACCCACAATTTGCAGTGGGCTCATGGCAAGGCTGGTGAAGATAGGGTGCATGTTGTACTTTCTGAAGAACAAGGGTGGCTGTTTATTGGGATATATGACGGTTTTAGTGGACCAGATGCACCTGATTTTCTGATGAGCAATCTTTATAGATTTATAGACAAGGAATTAGAGGGATTGCTCTGGCATTATGAATATAATACYGTCAATCCACTTGAACCCGAAGTCCATAAAAGAGTGAATGCAATGGTTCCTCCAGAATGCAAARGAGAGGAAATGTCRGAAAGTTCTTGCTGTTTGGAAGATTCTTGTCCAGCTAAGGTCAAGGATCAATCATCTARCAGYGAGATAGTGGAGGAAAACACTGACGTTAAGGTGAAKGTGGAACARCTTAATTGTGGAAGTCCTAGTATCTCCCGATTGGATGGTCAAGGTAGAAAAAGCATGAAACTTTATGAGTTACTTCAGATGGAATCTTGGGACGAACAGGGTTTTCTGTCAGTCTCAGAGCAAGGTAAGGATTCTTCCATTGCTAGGGAAATAASACAAGAAGATAGACCTAGACATCAGGATGAAGGCCCTACTACATCRGGAGAAAATGGAGGCACTGGRTTTAGTTCAAACAACCAAGTTCCTGTTGCTWCTTTTTCTGTTAAAGGACAAAGGCAGGATCCGAGAAAATCGTATATCAGTATGAAAATCAGAAAYATGTACAGGAAGCAGAAGTCCTTGCGCAAAAACCTYTTTCCWTGGAATTATGATTGGCATAGGGAAGAAGCCTGTGTTGACAAGAAAATAGTAGAAACCTTGGGGCCTATTAGAAAATGCAAGTCTGGMGTAGATCATAGTGCAGTTTTAAGAGCAATGGCACAAGCTCTTGAAAGAACAGAAGAAGCATACATGGACATGGTTGAGAATAATCTAGATAAAAATCCAGAGCTTGCCTTAATGGGATCTTGTGTTTTAGTGATGTTAATGAAGGATCAGGATGTTTATGTAATGAATGTTGGAGACAGCCGTGTAATTTTGGCGCAAGAAAGACCAAATGATCGTCATCCCAATCCAAGCTTCATCAAGGATGACGTGAGGCATAGAAATCGATCTAGAGARTCATTAGTTGGCATGGAGCTGGATAGAATTTCAGAGGAGTCTCCAATGCACAACATAAACAGTCGTCTTAACATGATGAACAAAAAYAGAGAGATWTCCCTTTGTGGACTGAAAATGAGGGCTGTTCAGCTTTCAACAGATCACAGCACAAGTATTGAAGAGGAAGTGTTTAGAATAAGAGCAGAACACCCAGATGATAATCAAGCCATATTCAATGATAGAGTGAAAGGACAATTAAAAGTCACCAGAGCATTTGGTGCCGGATTCCTGAAGAGGCCATCTTTCAATGAACCTCTACTGGAGATGTTTCGAGTTGATTATGTGGGCAATGCTCCTTACCTAAGTTGCACATCTTCCGTTGTTCATCATCGGCTTTGCTCAAGTGATCGGTTCTTGGTACTATCCTCCGATGGGCTTTACCAATATTTCAGCAATGAAGAGGTAGTTGCCCATGTTACGTGGTTCATGGAAAATGTCCCCGGTGGCGATCCTGCTCAATATCTTATYGCKGAGCTTCTTCTCCGTGCTGCYAAGAAGAATGGAATGGATTTTCATGAATTGCTTGATATTCCTCATGGAGATAGGCGTAAATATCATGATGATGTATCTGTTATGGTGGTTTCTTTGGAGGGAAGGATATGGAGATCATCGGGATAA 2589 0.4276 MGNGTSRVFSCLVPYNGKNGVDLEFLEPLDEGLGHSFCYVRPSIFESPAITPSNSERFTLDSSTLDSETLSGSFRNDGIEDSSATHKPGKNLPETTFKTISGASVSANVSTARTGNQNALLASNFLEPAASFEGTASFAAIPLQPVPRGSGPLNGFMSGPLERGFASGPLDKGGGFMSGPMEKGVMSGPLDATDKSNFSAPLARGRRRPHLHRLMRSVSGPMRNSLSRTFSKHSMGGSWMQRLFLHPVTQLAWNSKEAKFRPEVSRDCVEFEYKQTHNLQWAHGKAGEDRVHVVLSEEQGWLFIGIYDGFSGPDAPDFLMSNLYRFIDKELEGLLWHYEYNTVNPLEPEVHKRVNAMVPPECKXEEMSESSCCLEDSCPAKVKDQSSXSEIVEENTDVKVXVEQLNCGSPSISRLDGQGRKSMKLYELLQMESWDEQGFLSVSEQGKDSSIAREIXQEDRPRHQDEGPTTSGENGGTGFSSNNQVPVAXFSVKGQRQDPRKSYISMKIRNMYRKQKSLRKNLFPWNYDWHREEACVDKKIVETLGPIRKCKSGVDHSAVLRAMAQALERTEEAYMDMVENNLDKNPELALMGSCVLVMLMKDQDVYVMNVGDSRVILAQERPNDRHPNPSFIKDDVRHRNRSRESLVGMELDRISEESPMHNINSRLNMMNKNREISLCGLKMRAVQLSTDHSTSIEEEVFRIRAEHPDDNQAIFNDRVKGQLKVTRAFGAGFLKRPSFNEPLLEMFRVDYVGNAPYLSCTSSVVHHRLCSSDRFLVLSSDGLYQYFSNEEVVAHVTWFMENVPGGDPAQYLIAELLLRAAKKNGMDFHELLDIPHGDRRKYHDDVSVMVVSLEGRIWRSSG* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0985 862 MobiDBLite consensus disorder prediction 69 93 - -
Amo16g0985 862 Coils Coil 560 580 - -
Amo16g0985 862 PANTHER PROTEIN PHOSPHATASE 2C 32 498 862 - -
Amo16g0985 862 PANTHER PROTEIN PHOSPHATASE 2C 32 11 353 - -
Amo16g0985 862 Gene3D - 500 859 IPR036457 -
Amo16g0985 862 SUPERFAMILY PP2C-like 284 854 IPR036457 -
Amo16g0985 862 ProSiteProfiles PPM-type phosphatase domain profile. 272 853 IPR001932 -
Amo16g0985 862 MobiDBLite consensus disorder prediction 167 200 - -
Amo16g0985 862 PANTHER PROTEIN PHOSPHATASE 2C 498 862 IPR015655 GO:0004722|GO:0006470
Amo16g0985 862 PANTHER PROTEIN PHOSPHATASE 2C 11 353 IPR015655 GO:0004722|GO:0006470
Amo16g0985 862 Gene3D - 250 405 IPR036457 -
Amo16g0985 862 MobiDBLite consensus disorder prediction 439 484 - -
Amo16g0985 862 CDD PP2Cc 555 853 IPR001932 -
Amo16g0985 862 MobiDBLite consensus disorder prediction 468 484 - -
Amo16g0985 862 MobiDBLite consensus disorder prediction 451 467 - -
Amo16g0985 862 Pfam Protein phosphatase 2C 565 622 IPR001932 -
Amo16g0985 862 Pfam Protein phosphatase 2C 678 825 IPR001932 -
Amo16g0985 862 SMART PP2C_4 272 851 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0985 Amo-Chr16 15946914 15952007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0985 1 862 PP2C-type Phosphatase Gene Family AT2G46920 66.322 0.0 1115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0985 - - gmx:100786856 1432.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0985 16 15946914 15952007 Amo06g0048 06 500640 504803 hybridization