Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0963 ATGTGTGTGATAAGAACAAAACGTAGTGTCGTTAAGCCAGCTGAAGAGACACCATTGACCACACTAGACCTATCATTGATCGATAAGATACCTGTTCTAAGGTGCGATGCCAGAACGTTGCATGTGTTCAGCCATGGCCCTGAAGCTGCAAGTGTCATAAGAGAAGCCTTGTCTAGAGCATTGGTTCCTTATACCCTCTTGCTGGGCGCCTCATTCACAAATCGGAACAAAATGATGAAGCAGGGTGCCTCCAAGTTCAATGCTCCGGGGACGTCTATTCCATATCATCATCTTCTTCCTGATGATGTTCCTCAAACCGAAGGCATTGACCCCCTTGTCAAAATGCAGGTGACACAATTTGGATGTGGAGGATATATGATAGGCCTCGTATTCTGCCACACCATTTGCGATGGCCTTGGTGCTGCCCAATTTCTCAACGCCGTAGGCGAGCTAGCTAGAGGTCTTCACACCCCCACCATTGAACCGCTCTGGCACAGACACTTCGCTCCCTCACCACCACCATCACCGTCGCCACCTCCACTCCCTAAACTACCACCAACCATGCCAAGCTACAAGCTAGAACACGCTACCGTAGACATCCCCATGCATCGAATCAACAACCTCAAGCAAGAATTTCAGCGGCTCACCGGACTCGCTTGCTCTTCCTTCGAAATTGTAGCCGCGGGATTATGGACAAGCAGAGCAAGAGCCATTGATTTCGAACCCAACGCCGAGCTGAAGCTTGTGTTCTTCGCTAACTGCCGTCAAATCTTGGACCCTCCTCTCCCCGCTGGCTTCTACGGCAACTGTTTCTTCCCAGTGACGATCACCGCTTCCTACGAGTCGCTCAGAGACGCGTCGCTCTTCGATGTGGTGAAAATGATACAAGATGCAAAGACCAAATTACCCTCTCGAGTTTGCAGTATTGAAGGGTGCCTGCGGGGATGA 948 0.5053 MCVIRTKRSVVKPAEETPLTTLDLSLIDKIPVLRCDARTLHVFSHGPEAASVIREALSRALVPYTLLLGASFTNRNKMMKQGASKFNAPGTSIPYHHLLPDDVPQTEGIDPLVKMQVTQFGCGGYMIGLVFCHTICDGLGAAQFLNAVGELARGLHTPTIEPLWHRHFAPSPPPSPSPPPLPKLPPTMPSYKLEHATVDIPMHRINNLKQEFQRLTGLACSSFEIVAAGLWTSRARAIDFEPNAELKLVFFANCRQILDPPLPAGFYGNCFFPVTITASYESLRDASLFDVVKMIQDAKTKLPSRVCSIEGCLRG* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0963 315 MobiDBLite consensus disorder prediction 167 186 - -
Amo16g0963 315 Gene3D - 182 308 IPR023213 -
Amo16g0963 315 Gene3D - 1 80 IPR023213 -
Amo16g0963 315 Pfam Transferase family 5 69 - -
Amo16g0963 315 Pfam Transferase family 96 301 - -
Amo16g0963 315 PANTHER ACYL TRANSFERASE 4 1 305 - -
Amo16g0963 315 MobiDBLite consensus disorder prediction 166 186 - -
Amo16g0963 315 Gene3D - 81 181 IPR023213 -
Amo16g0963 315 PANTHER ACYL TRANSFERASE 4 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0963 Amo-Chr16 15499568 15500902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0963 9 275 Monolignol Biosynthesis Gene Families AT5G48930 29.450 3.35e-21 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0963 - - aip:107646575 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0963 16 15499568 15500902 Amo06g0076 06 797567 800186 hybridization