Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0924 ATGATTTTCAAGACACTAGAAGAAGTTGGAAAGTTCTACAAACATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCGGGATGGAGACAAGATTAAGAATCAACTAGTTGTATGCTCTAGAGAGGGAAGGTGGAAATCAAAGAGATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTACAGCCAGAATTTACGTACACATAATGAAGGATACCAGGCTGAGATGCTCAAACAACACAGGGAGTTTAGCATATTCGTGCGTCGCACCATCGAAACCCACGAGAAAGCCGGAATTAGACCAAATTCCAGTTTACTTGGATCACCACTTTTGGGCCGGGATGAGAAGCACGCAAAGGAGCGAGAGTATGCATTCATTTTTCAACAAGTTCATCACACGGAATAGCTCCTTGAGACAATTCGTGAAGCAATACGACAATTGA 462 0.4199 MIFKTLEEVGKFYKHYSKLAGFSTKIRNTTRDGDKIKNQLVVCSREGRWKSKRSPTLKTNPSAGLNCTARIYVHIMKDTRLRCSNNTGSLAYSCVAPSKPTRKPELDQIPVYLDHHFWAGMRSTQRSESMHSFFNKFITRNSSLRQFVKQYDN* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0924 153 Pfam FAR1 DNA-binding domain 11 82 IPR004330 -
Amo16g0924 153 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 109 153 IPR031052 GO:0006355
Amo16g0924 153 PANTHER OS06G0517100 PROTEIN 109 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0924 Amo-Chr16 14764968 14766407 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g0924 FAR1 7.6e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0924 - - aip:107646405 147.902