Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0917 ATGATCAAAATACCATCTCTTACTTTACTTCTTCAGCTTATGCTTCTGTTGTTCCTTACAAGTACCATTCAGTTGGTATTTGCAAAGGGGAAAGACAATGTTAGAGATGCATGCAAGGTGACAAGGTATCCCAAACTTTGTTTCCGCTCGCTGGCACAGTTCTCCAACGCTGCCGGAACGAGCCCCAGCAAATGGGCAAGGGCAGGGGTGTCAGTGACAATAGGAGAGGTTAAGCATGTTTTAGTATACCTTGCAAGGCTGAAGAAGATTCAAGGACAAATAGGGGGAAGCAGGAGCAGAGCTGCACTCTCTGATTGCATCGAGACTTCTAGAGATGCCCTCGATGAGCTTCATAGGTCGCTTGGTGTGCTCAGGAAGCTCAGCAAAAACACCTTTGGTACCCAAATGGATGACCTTAACACATGGATCAGTGCAGCACTCACTGATCAGGATACTTGCCTAGATGGATTTCAAGGCCAAAGAATAGGAAAGGAGATTAGGTTGCTGAAAATTAAGGTTATAAGATCATATTACATAACCAGTAATGCTTTAGCTCTTGTTAACAAGCTTGCCACTACAGGTATTGGAAGCATAGCGGATCCATAG 606 0.4455 MIKIPSLTLLLQLMLLLFLTSTIQLVFAKGKDNVRDACKVTRYPKLCFRSLAQFSNAAGTSPSKWARAGVSVTIGEVKHVLVYLARLKKIQGQIGGSRSRAALSDCIETSRDALDELHRSLGVLRKLSKNTFGTQMDDLNTWISAALTDQDTCLDGFQGQRIGKEIRLLKIKVIRSYYITSNALALVNKLATTGIGSIADP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0917 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 192 IPR035513 -
Amo16g0917 201 SMART PMEI_2 29 186 IPR006501 GO:0004857
Amo16g0917 201 CDD PMEI-like_3 37 192 - -
Amo16g0917 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 16 185 - -
Amo16g0917 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 190 IPR035513 -
Amo16g0917 201 Pfam Plant invertase/pectin methylesterase inhibitor 33 186 IPR006501 GO:0004857
Amo16g0917 201 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 190 IPR006501 GO:0004857
Amo16g0917 201 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 16 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0917 Amo-Chr16 14695490 14696095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0917 34 198 Carbohydrate Esterase AT3G14310 36.686 1.05e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0917 - - adu:107492431 233.802