Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0908 ATGAATCCAAATTCAATAGTAATGGCTTTGAAAAACTTGTCCATTATTATTTTGCTCTTTGTTAATTCCCTTATTGTCCTTTCCATCTTCCCTACATTATCCATAGCTGCTAACCAGAAATCAGTTCCCATAGTTTCCCCACAAACCATATGCAAGTCCACTCTATACCCTTCTTACTGCGAAAACGTGTTTGCTAATCAAAATGGCACCGTTTTCGACTATGGCCGCATTTCCATTCGAAAATCCCTATCCCAGTCCCGCAAGTTCTTGAACTCACTTGATTCATATCTTGAAAAGAAATCTTCTTTATCTCAACCCACAATTAGCACTCTCCAAGATTGTAAGTTTCTCACTGAGTTAAGCTTTGAATACTTATCAAACGCCCTTGACACCGTTGAAAAAGCCAGCGATGTTCTTCCAACATCACAAGCCGATGATGCACACACCGTCCTCAGTGCTGTCTTGACTAATCAACAAACTTGTTTAGATGAAGTTATAAGTCTAACCACTGCTTCTGATCAGAGAGTTAAGGATGATATCTCGTCCTCACTCTCTGATTATTTGAAGCTTCTCAGTGTCTCCCTTGCCCTCTACAAGGAGGGGTGGGTTCCTGAGAAGAAAATCTCAACCTTGTTAGAACACAAAGGAAGACACTTGGAGTTTCGTAACGGCCATTTACCATTGAAGATGTCGAGTAGAGTACGCGAAATTTACGATTCTGCCATTGGACGACACGGTAGAAAACTGCTGAGCGTGGACGACAGTGAAAATTACGTTCTGGTGAGTGACATTGTGGTTGTTAGCCAGGATGGAAGTGGAAACTTCACGACCATCAACGACGCCATTGGCGCAGCACCGAATAACACCGATGGTAGCAATGGCTACTTCCTCATCTTCATCACTGAGGGTGTGTATCAAGAGTATGTTTCTATAGCCAAAAACAAGAAGTACTTGATGATACTTGGAGAAGGAATCAACCGAACAATTATCACAGGTGATCACAATGTCGTGGACGGTTCTACAACATTCAACTCAGCAACATTTGCTGTAGTGGCACAAGGGTTTGTAGCAGTCAACGTAACATTTCGCAACACTGCGGGGCCAAGCAAGCACCAGGCAGTTGCAGTTAGAAATGGAGCAGATTTGTCCACTTTCTATAGCTGCAGCTTTGAAGCCTATCAAGACACGTTGTACACACATTCTCTAAGGCAATTCTACCGCGAATGCGATATTTATGGCACAGTTGACTTCATATTTGGAAACGCTGCAGTGGTTTTCCAAAGCTGCAACTTGTATCCCCGTCTTCCCATGAGTGGACAATTCAATGCCATCACTGCTCAAGGTCGAACCGATCCAAACCAAAACACAGGCACTTCCATACACAATTCCACCATAACAGCTGCCGGTGATTTGGCCGCGGTGGTTGGAAGCGTGAAAACGTACCTTGGGAGGCCATGGAAGGAGTATTCGACCACGGTTTATACGTTATGTTTGATGGATAGTTTGATTGATCCTTCTGGTTGGAGTATATGGAGTGGAGACTTTGCATTGAGCACTTTGTATTATGCGGAGTATAATAACGGTGGAGGTGGTTCAAACACCACAAATAGAGTGACGTGGCCTGGTTATCACGTTTTAAACAACGCTGCTGATGCAACTAATTGGACCGTCTCTAACTTCTTGGGTGGGGATAGTTGGCTGCCTCAAACTGGTGTCCCTTACTTGAGTGGATTGTTCTAG 1740 0.4379 MNPNSIVMALKNLSIIILLFVNSLIVLSIFPTLSIAANQKSVPIVSPQTICKSTLYPSYCENVFANQNGTVFDYGRISIRKSLSQSRKFLNSLDSYLEKKSSLSQPTISTLQDCKFLTELSFEYLSNALDTVEKASDVLPTSQADDAHTVLSAVLTNQQTCLDEVISLTTASDQRVKDDISSSLSDYLKLLSVSLALYKEGWVPEKKISTLLEHKGRHLEFRNGHLPLKMSSRVREIYDSAIGRHGRKLLSVDDSENYVLVSDIVVVSQDGSGNFTTINDAIGAAPNNTDGSNGYFLIFITEGVYQEYVSIAKNKKYLMILGEGINRTIITGDHNVVDGSTTFNSATFAVVAQGFVAVNVTFRNTAGPSKHQAVAVRNGADLSTFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNSTITAAGDLAAVVGSVKTYLGRPWKEYSTTVYTLCLMDSLIDPSGWSIWSGDFALSTLYYAEYNNGGGGSNTTNRVTWPGYHVLNNAADATNWTVSNFLGGDSWLPQTGVPYLSGLF* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0908 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 199 IPR035513 -
Amo16g0908 579 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 32 577 - -
Amo16g0908 579 Pfam Pectinesterase 265 564 IPR000070 GO:0030599|GO:0042545
Amo16g0908 579 PANTHER PECTINESTERASE 32 577 - -
Amo16g0908 579 SUPERFAMILY Pectin lyase-like 261 577 IPR011050 -
Amo16g0908 579 Pfam Plant invertase/pectin methylesterase inhibitor 48 197 IPR006501 GO:0004857
Amo16g0908 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 47 200 IPR035513 -
Amo16g0908 579 SMART PMEI_2 42 197 IPR006501 GO:0004857
Amo16g0908 579 Gene3D - 262 579 IPR012334 -
Amo16g0908 579 CDD PMEI-like_3 49 197 - -
Amo16g0908 579 ProSitePatterns Pectinesterase signature 2. 411 420 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0908 Amo-Chr16 14443122 14445719 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0908 24 579 Carbohydrate Esterase AT4G02330 58.392 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0908 K01051 - gmx:100813051 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0908 16 14443122 14445719 Amo16g0908 16 14443122 14445719 ECH
Amo16g0908 16 14443122 14445719 Amo12g3145 12 120055880 120062826 PCT