Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0897 ATGTCATCCGCAACAACTGCACCATGGATCACTTCTCTCTCGTGTGCATCTCCAACCTCAGGAGACACTCTACCTCAATGGCTGAGATTCATTTTCCTGTCTCCATGTCCTCAGAGAGCTATGCTATCTGCCATTGATGTCTTACTCTTGCTCATTCTCTTTGTGTTTGCCGTGATCAAGCTCTATTCTAGGTTCACCTCCAATGGCTCCTCCTCCACCAATGGACTCAACAAGCCACTTATCAGAAATAATAACAGACCCTTTGTCTCAGTAACCATATGGTTTAAGCTAACTTTAGCTGCAACTTCTGTTCTGGCCTTATTGTACACCATTGCTTGTGTTCTGGTATTTACCAGTTCAACTGAGATTCCATGGAAGCAAGTTGATGGAATGTTTTGGTTAGTCCAGGCCATAACACAATTAATACTTGCAGTGTTAATCATCCATGAGAAAAGATTCCAAGCTGTAACTCATCCTCTTACACTTCGATTTTATTGGATTGTGTATTTTATTATTACTTGCTTGTTTGTGGCTTCTGGGATTATACGTTTGGTCTCTGTGGATGTGGATGGAACCAAAGAGTTCATCTTCAAGGTGGATGACATAGCTTCTTTCATATCCCTGCCTCTGTCGCTGTTTCTTCTCTTTGTCGCAGTCAAAGGGTCCACTGGCATTATGTCCAATGAGGAAATACAACCACTTATTGATGAGGAAACTAAGCTATATGATGATACTCTGGAAAAATCTAGAGTCACTGAATTTGCTTCGGCTTCTATAGTATCCAAGGCATTTTGGATTTGGATAAACCCCTTGTTGAGTAAAGGGTACAAGTCCCCATTGAAGATTGATGAGATTCCAACCCTTTCACCTGAGCATAGAGCTGAGAGGATGTCTGTTATCTTTGAATCAAAATGGCCAAAATCAAATGAAAGGACGAAGCATCCGGTTCGAGTCACATTGATCCGGTGCTTCTGGAGGGAATTGGCCTTCACCGCATTCCTTGCTGTTGTTAGGGTCTGTGTCATGTTTGTGGGTCCAATTCTCATACAAAGCTTTGTTGATTTCACTTCAGGGAAGAGAAGTTCTGTTTATGAAGGGTACTACCTAGTGTTGATCCTCCTTGTTGCTAAGTTTGTGGAAGTTTTAACCACTCATCATTTCAACTTCAATTCTCAGAAGCTTGGGATGCTTATCCGATGCACACTCATCACTTCTCTGTACAAGAAGGGCCTCAAGCTTTCTTGCTCCTCAAGGCAAGATCATGGTGTTGGGACTATTGTGAATTACATGGCTGTTGATGCTCAACAACTCTCTGATATGATGCTTCAGTTGCATTCCGTGTGGGTGACTCCGCTTCAAGTCACTGTTGCCTTGTTTCTACTTTATAATGCTTTGGGTGCCTCTGTAGTTACAGCCTTACTTGGTCTTCTTGGTGTTCTTGCATTTGTTGTGGTTGGCACAAAGAGAAACAACCGTTTTCAATTCAATGTGATGAAGAATCGCGACTCGAGAATGAAAGCAATGAATGAGATGCTTAACTACATGCGTGTGATCAAGTTCCAGGCTTGGGAGGAGCATTTCAATGGGAGAATCATGGGGTTCCGTGAGTCAGAGTTTGAGTGGTTGTCCAAGTTCATGTTCTCGATTTGTGGCAACATTGTTGTGATGTGGAGCACACCATTGCTGATATCAACTCTGACATTTGGCACAGCTATTTTGCTTGGAGTTCGCCTCGACGCAGCCACAGTTTTCACCACAACAACAATATTTAAGATCTTGCAGGAACCAATTAGGACGTTTCCACAGTCCATGATATCTCTTTCACAAGCAATGATATCACTGGGAAGGCTAGACAGATACATGTTGAGCAGGGAATTGTCGAATGATTCGGTCGAAAGAGAGGAAGGCTGCAGTGGACACACTGCTGTTGAGGTCTGTGATGGGACCTTCAGCTGGGATGATGACAGCCTACAGCATGACTTGAAGGATATCAATTTGGAGATCAGAAAAGGGGATCTTACAGCAATTGTTGGGACTGTAGGGTCTGGAAAGTCATCTCTCTTGGCATCAATTCTTGGTGAAATGCGCAAAGTTTCTGGAAAGGTTCGGGTTTGTGGAAGTACTGCTTATGTTGCACAGACATCTTGGATTCAGAATGGGACCATTGAGGAAAACATTCTCTTTGGTATGGCAATGAACAGACAAAAGTACAATGAAGTCATCAGGGTTTGTTGCTTGGAGAAAGATTTGGAAATGATGGAGTTTGGGGATCAGACTGAGATTGGAGAGCGTGGCATCAACCTCAGTGGTGGACAGAAGCAGCGCATACAACTCGCCAGGGCTGTGTACCAAGACTGTGATATCTATCTTCTTGATGATGTCTTTAGTGCTGTTGATGCTCACACTGGTTCTGAAATATTTAAGGAATGTGTGAGGGGGGCTTTAAAAGGCAAGACTGTAGTCCTTGTAACACACCAAGTAGATTTTCTACATAATGTGGATCTTATATTGGTCATGAAAGATGGAATGATAGTCCAAGCAGGAAAGTATGATGATATACTTGATTCTGGACTGGATTTCAAAGCTTTGGTTGTTGCACACGAAACCTCCATGGAAATAGTAGAGCAAGGCTCAACTACTGTCGGCGAAAGCCTGAATAGTCCATCGAAATCTCCAACACCTTCTGGTCACAGAGGAGCCAATGGTGAGAGCAATTCTCTTGATCAGCCAAAGTCTGGCAATGAAAGTTCTAAACTGATAAAAGAAGAGGAAAGGGAAACAGGCAAAGTTAGCTTGCATATGTACAAACTCTACTGCACTGAGGCTTTTGGGTGGTGGGGCATTACAGGAATATTGATTCTTTCTTTGCTATGGCAAGCATCTTTGATGGCAAGTGATTATTGGCTAGCATATGAAACATCAGAAGAACGTGCTCAAGTGTTCAACCCTTCTCTGTTTATTTCCATCTATGCAATCATCTCTCTTGTTTCAGTTTTTTTGGTAGTTATAAGATCCTACTCATACACATTCATGGGGCTAAAGACGGCACAACTTTTCTTCACTCAAATTCTTCACAGCATCCTTCATGCACCCATGTCTTTCTTTGACACTACACCATCAGGAAGAATTCTTAGTAGGGCATCCACTGATCAGACCAATGTTGATGTTCTTCTTCCCTTGTTTCTTGGAATTGTCATTGCCATGTACATTACAGTGCTCAGCATCTTCATCATCACCTGTCAAAATTCATGGCCAACAGCATTCTTGTTGATTCCTCTTGTTTGGTTGAACATATGGTACCGGGGTTATTTTCTTGCTTCATCTCGCGAGTTAACTCGACTGGATCAAATTACCAAAGCACCTGTTATTCATCACTTCTCGGAAAGCATTTCAGGGGTCATGACAGTCCGAGCATTCAGAAAGCAGAAGAGATTCACCGAAGAGAATGTTAAAAGGGTGAATGCTAATTTAAGAATGGATTTCCACAACTATAGTTCCAATGAGTGGTTGGGATTCCGCTTAGAATTGCTTGGAAGCTTGGTTTTCTGCATTTCAGCCATGTTCATGATCCTCTTACCAAGCAATATCATAAAGCCAGAAAATGTTGGTTTATCTCTTTCTTATGGTTTGTCATTGAATGCTGTCTTGTTCTGGGCTGTGTACATGAGCTGCTTCATTGAGAACAAAATGGTATCTGTTGAGAGGATAAAACAGTTTACAAATATTCCATCAGAACCGGCATGGATTATTAAGGATCGTTTGCCTCCTTCAAATTGGCCAGGTCAAGGCAATGTTGATATTAAAGACTTGCAGGTCCGGTATCGTCCGAACACTCCTCTAGTTCTCAAGGGCATTACTTTAAGCATTTATGGAGGAGAAAAGATTGGTGTTGTAGGCCGAACTGGAAGTGGAAAATCAACTCTGATTCAAGTTTTCTTCAGGCTGGTGGAACCTTCAGGAGGCAAAATAATTATTGATGGCATTGACATATCAGTGTTGGGGCTTCATGATCTTAGATCTCGCTTTGGTATCATCCCTCAGGAGCCTGTCCTTTTCGAAGGAACTGTCAGAAGCAATATTGATCCAACTGGACAGTACACAGATGAAGATATATGGAAGAGTTTGGAAAGGTGTCAACTAAAAGAGGCAGTGTCTGCTAAGCCTGAAAAGCTTGACTCTTTAGTGGTAGATAATGGAGAGAATTGGAGTGTGGGGCAGAGGCAGTTGCTTTGTTTGGGGCGAGTTATGCTTAAGCAAAGCCGGCTCTTGTTTATGGACGAAGCAACGGCTTCTGTTGATTCGCAAACTGATGGTGTGATTCAGAAGATCATAAGAGAGGACTTTGCAGCATGTACCATCATCAGCATTGCTCACAGAATACCTACAGTCATGGACTGTGATAGAGTTTTAGTTGTAGATGCAGGGAGAGCAAAAGAATTTGATAAGCCTTCAAACTTGCTTCAAAGGCCATCTCTGTTTGGAGCATTGGTTCACGAGTATGCTAGCCGTTCCACAGGACTATAA 4524 0.4246 MSSATTAPWITSLSCASPTSGDTLPQWLRFIFLSPCPQRAMLSAIDVLLLLILFVFAVIKLYSRFTSNGSSSTNGLNKPLIRNNNRPFVSVTIWFKLTLAATSVLALLYTIACVLVFTSSTEIPWKQVDGMFWLVQAITQLILAVLIIHEKRFQAVTHPLTLRFYWIVYFIITCLFVASGIIRLVSVDVDGTKEFIFKVDDIASFISLPLSLFLLFVAVKGSTGIMSNEEIQPLIDEETKLYDDTLEKSRVTEFASASIVSKAFWIWINPLLSKGYKSPLKIDEIPTLSPEHRAERMSVIFESKWPKSNERTKHPVRVTLIRCFWRELAFTAFLAVVRVCVMFVGPILIQSFVDFTSGKRSSVYEGYYLVLILLVAKFVEVLTTHHFNFNSQKLGMLIRCTLITSLYKKGLKLSCSSRQDHGVGTIVNYMAVDAQQLSDMMLQLHSVWVTPLQVTVALFLLYNALGASVVTALLGLLGVLAFVVVGTKRNNRFQFNVMKNRDSRMKAMNEMLNYMRVIKFQAWEEHFNGRIMGFRESEFEWLSKFMFSICGNIVVMWSTPLLISTLTFGTAILLGVRLDAATVFTTTTIFKILQEPIRTFPQSMISLSQAMISLGRLDRYMLSRELSNDSVEREEGCSGHTAVEVCDGTFSWDDDSLQHDLKDINLEIRKGDLTAIVGTVGSGKSSLLASILGEMRKVSGKVRVCGSTAYVAQTSWIQNGTIEENILFGMAMNRQKYNEVIRVCCLEKDLEMMEFGDQTEIGERGINLSGGQKQRIQLARAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTVVLVTHQVDFLHNVDLILVMKDGMIVQAGKYDDILDSGLDFKALVVAHETSMEIVEQGSTTVGESLNSPSKSPTPSGHRGANGESNSLDQPKSGNESSKLIKEEERETGKVSLHMYKLYCTEAFGWWGITGILILSLLWQASLMASDYWLAYETSEERAQVFNPSLFISIYAIISLVSVFLVVIRSYSYTFMGLKTAQLFFTQILHSILHAPMSFFDTTPSGRILSRASTDQTNVDVLLPLFLGIVIAMYITVLSIFIITCQNSWPTAFLLIPLVWLNIWYRGYFLASSRELTRLDQITKAPVIHHFSESISGVMTVRAFRKQKRFTEENVKRVNANLRMDFHNYSSNEWLGFRLELLGSLVFCISAMFMILLPSNIIKPENVGLSLSYGLSLNAVLFWAVYMSCFIENKMVSVERIKQFTNIPSEPAWIIKDRLPPSNWPGQGNVDIKDLQVRYRPNTPLVLKGITLSIYGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGKIIIDGIDISVLGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEDIWKSLERCQLKEAVSAKPEKLDSLVVDNGENWSVGQRQLLCLGRVMLKQSRLLFMDEATASVDSQTDGVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVVDAGRAKEFDKPSNLLQRPSLFGALVHEYASRSTGL* 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0897 1507 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 86 1506 - -
Amo16g0897 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1258 1498 IPR027417 -
Amo16g0897 1507 Gene3D ABC transporter type 1, transmembrane domain 308 621 IPR036640 GO:0005524|GO:0016021
Amo16g0897 1507 Gene3D ABC transporter type 1, transmembrane domain 912 1246 IPR036640 GO:0005524|GO:0016021
Amo16g0897 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1265 1499 IPR003439 GO:0005524
Amo16g0897 1507 MobiDBLite consensus disorder prediction 877 914 - -
Amo16g0897 1507 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 86 1506 - -
Amo16g0897 1507 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Amo16g0897 1507 Pfam ABC transporter 1282 1430 IPR003439 GO:0005524
Amo16g0897 1507 Coils Coil 1136 1156 - -
Amo16g0897 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 950 1228 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo16g0897 1507 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
Amo16g0897 1507 SUPERFAMILY ABC transporter transmembrane region 320 621 IPR036640 GO:0005524|GO:0016021
Amo16g0897 1507 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524
Amo16g0897 1507 Gene3D - 1249 1497 IPR027417 -
Amo16g0897 1507 Pfam ABC transporter 661 794 IPR003439 GO:0005524
Amo16g0897 1507 SMART AAA_5 1291 1475 IPR003593 -
Amo16g0897 1507 SMART AAA_5 670 851 IPR003593 -
Amo16g0897 1507 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 641 863 IPR027417 -
Amo16g0897 1507 Pfam ABC transporter transmembrane region 981 1203 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo16g0897 1507 Pfam ABC transporter transmembrane region 330 596 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo16g0897 1507 SUPERFAMILY ABC transporter transmembrane region 945 1245 IPR036640 GO:0005524|GO:0016021
Amo16g0897 1507 CDD ABCC_MRP_domain2 1263 1483 - -
Amo16g0897 1507 MobiDBLite consensus disorder prediction 877 920 - -
Amo16g0897 1507 Gene3D - 622 884 IPR027417 -
Amo16g0897 1507 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 329 609 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Amo16g0897 1507 CDD ABC_6TM_ABCC_D2 948 1240 IPR044726 GO:0140359
Amo16g0897 1507 CDD ABCC_MRP_domain1 643 842 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0897 Amo-Chr16 14340674 14347834 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0897 643 859 Calmodulin-binding Proteins AT2G36910 31.760 6.54e-24 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0897 - K05666 gmx:100793361 2458.33