Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0861 ATGGTGGAACAGAGGAAGCCTCTCGTTCTCTCTTCCACCAAACACCTCATCAATTCCTTGTTGAGCTCTTCCCCAAGCAACGACCCTGCAACCGCCACCGCCACAGCCACTTCCACTCCCCTCTTCCAATTACCTGTGGGGATTCTCCGATTCTCCGACCACCCGAATCACCATCCCCAATTACCTTCTCTTGACGATTCTGCCCTTGTTGGCCTCTCCACTTTACTTCTTAAGAGGCTCTCTGTCACTTCTGGTTCACTGGTTCTGGTGAAGAATGCTGAGATGGGTGTGCAGAGGGTTGCTGTGGCCATTGCTCTTGATCCTCCAGGAACTACTACTACACTTGAGCCTGATTCTGATTTGAATTTATCATCATCTTCTTCTCATCCTGCCAGAGTAATGCTTGTGTTTCCTTCTTGTGATTTCCCTGCTAGTGGGGCCTTGTTGTTTGATCATGAAGTTGCTTATTTGTCTCCACTTTTAGCATTTAATCTAAATTTGCACATGTCATGCTTAAAATCCATTCTACAACATGGAGAGGACACTTTAGCTTCTTATTTCAAGCCCCAATTTTGTAATGAGGATGCTGCAAAAAGCAATGAGGATTATGTTATCAATGTTGAGTTGGCACCTTTTGCTCAAGCTCTTAGGTTTGCATCACATTTGAGGGTTTCTTTTGTGAAGATGCCAGAATGTGGCATCCTTGAATCTATTAGAGAAAGTTCACCTATTGAATCTAAAGAACGGCAAGACATGATTGACTTAGCATTACAAAAGTACTTCGAAGTCGATAGATATTTGTCAAGAGGAGATGTTTTTGGGATTAACATAAACTGGAAATGCAATTCAACTATTTGCATTCCGTGCAACCAAAAATCAGATAAGAAAAATGACAGTAACCTTATCTACTTCAAGGTCATTGCTATGGAACCATCAGATGAACTGTTCCTTCGAGTCAATAAAACCTCAACTGCTCTGGTCCTAGGAGGGAGTTCACCATCCGCCCTTCCTCCAGATTTGTTAATTGCTGGACCAGAAGGACCTGTGCCATTGCAAGGAGACACAGTAAAGATATTGGGTTCAATACTTACACCAACTTTCTGTCCATCGGCCCTTTCTTCGAAGTTTAGAATTTCAGTTCTATTGTATGGCTTGGCAGGTTGTGGGAAGAGAACTGTAGTTAGATATGTTGCTCGTCGACTGGGCTTGCATGTGGTGGAATATAACTGTCATGATCTGATGGCGTCTGAAAGAAAATCTATTGCTTTGGCTCAAGCTTTCAAGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTACGGCATTTTGATGTTTTTCGAGATTCACCTTCTCCCGATGGTTCACTAAATGATCAAAGAGGCAATACATCTGAAGTAGCATCTGTTATCAGGAGATTCACTGAACCAATTAGTGAACATGATAGCAACTCCAGGGGAAAATCAAATGGTGAATTTGATTACAAAGATATTTACTTTTGCAACATGCTGGTGAAGGTTGAGAAGAATGTTGAGAAAACAAGCGTGCATCAAATCCTCTTGATTGCTGCTGCTGACAGCTCAGAAGGTCTACCTCCAACTATCAGACGCTGCTTTAGCCATGAAATAAGTATGGGACCTTTGACTGAAGAGCAAAGGACTGAAATGTTATCCTACTCACTTCAAAGTGTTTCTGGACTCCTCTCTGATGCTGATTTGGAGGGTTTTGTAAAAGAAATAGTTGGTCAAACATCTGGTTTTATGCCCAGGGATATGTGTGCTCTAATTGCTGATGCTGGTGCCAACTTATTTCCCAGGAACGATACTGAAGTGGACAAACATAGTTTTGAGGATATAGATGCTTCTTCTAGTTCCAAAGTGACACAGGAGAAGGAGAAAGTTTCACCTCAAATTCCTAGGAAGGAAGATTTGATGAATGCTTTAGAACAATCAAAGAAAAGAAATGCATCAGCATTGGGCACTCCAAAAGTTCCCAATGTGAAATGGGAAGATGTCGGTGGGCTTGAAGAAGTCAAAAAATCAATCCTGGATACCGTTCAGTTAAAAGAGAAAAATGAGGAGCTTTTGAAGAGTCTAGCCTACCGCCTAAGGTTTGACATGGAAGCTATGAAATTGCCCCTCCTGCATAAAGATCTTTTTGCATCTGGATTACGAAAGAGATCCGGCGTTCTTCTGTACGGTCCTCCTGGAACTGGCAAAACATTATTAGCAAAAGCTGTTGCTACTGAATGTTCCTTAAATTTTCTTAGTGTAAAAGGTCCTGAACTGATAAACATGTACATCGGAGAGTCTGAGAAGAATGTTAGAGACATTTTCCAGAAGGCCAGATCAGCACGTCCATGTGTTATCTTCTTCGATGAGCTTGATTCTCTCGCCCCAGCTCGGGGTGCTTCTGGAGATTCTGGGGGCGTTATGGACAGGGTGGTTTCTCAGATGCTAGCCGAGATCGATGGCTTAAGTGATTCGACACAGGATCTGTTTATTATTGGTGCAAGTAATAGACCGGATTTGATAGATCCGGCACTTCTACGTCCCGGTAGATTCGATAAGCTTCTATATGTTGGAGTTAACTCCGATGCGTCTTATAGGGAGCGGGTCTTGAAAGCACTAACTCGAAAGTTCAAGTTGCACGAAGATGTTTCACTGTACTCTATAGCGAAAAAATGTCCGCCGAACTTCACCGGAGCTGACATGTATGCATTGTGTGCAGACGCCTGGTTCCATGCCGCAAAGCGCAAGGTTTCGAGCACAAATCCGGAGTCTTCCAGCCAAGATAGTGAAGCAGATTCTGTAGTTGTTGAATACAGTGATTTTGTCCAGGTCCTAGTAGAGCTGTCTCCTTCCCTATCCATGGCTGAGCTCCAGAAGTATGAGAAACTTAGAGATCAGTTTGAGGGCACGTCTAAATAA 2928 0.4293 MVEQRKPLVLSSTKHLINSLLSSSPSNDPATATATATSTPLFQLPVGILRFSDHPNHHPQLPSLDDSALVGLSTLLLKRLSVTSGSLVLVKNAEMGVQRVAVAIALDPPGTTTTLEPDSDLNLSSSSSHPARVMLVFPSCDFPASGALLFDHEVAYLSPLLAFNLNLHMSCLKSILQHGEDTLASYFKPQFCNEDAAKSNEDYVINVELAPFAQALRFASHLRVSFVKMPECGILESIRESSPIESKERQDMIDLALQKYFEVDRYLSRGDVFGININWKCNSTICIPCNQKSDKKNDSNLIYFKVIAMEPSDELFLRVNKTSTALVLGGSSPSALPPDLLIAGPEGPVPLQGDTVKILGSILTPTFCPSALSSKFRISVLLYGLAGCGKRTVVRYVARRLGLHVVEYNCHDLMASERKSIALAQAFKTAQRYSPAILLLRHFDVFRDSPSPDGSLNDQRGNTSEVASVIRRFTEPISEHDSNSRGKSNGEFDYKDIYFCNMLVKVEKNVEKTSVHQILLIAAADSSEGLPPTIRRCFSHEISMGPLTEEQRTEMLSYSLQSVSGLLSDADLEGFVKEIVGQTSGFMPRDMCALIADAGANLFPRNDTEVDKHSFEDIDASSSSKVTQEKEKVSPQIPRKEDLMNALEQSKKRNASALGTPKVPNVKWEDVGGLEEVKKSILDTVQLKEKNEELLKSLAYRLRFDMEAMKLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHEDVSLYSIAKKCPPNFTGADMYALCADAWFHAAKRKVSSTNPESSSQDSEADSVVVEYSDFVQVLVELSPSLSMAELQKYEKLRDQFEGTSK* 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0861 975 Gene3D - 355 565 IPR027417 -
Amo16g0861 975 Gene3D - 707 964 IPR027417 -
Amo16g0861 975 PANTHER AAA-FAMILY ATPASE 707 971 - -
Amo16g0861 975 CDD AAA 713 861 - -
Amo16g0861 975 ProSitePatterns AAA-protein family signature. 832 850 IPR003960 GO:0005524|GO:0016887
Amo16g0861 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 664 969 IPR027417 -
Amo16g0861 975 CDD AAA 379 440 - -
Amo16g0861 975 PANTHER PEROXISOME ASSEMBLY FACTOR 2 37 696 - -
Amo16g0861 975 MobiDBLite consensus disorder prediction 616 636 - -
Amo16g0861 975 PANTHER AAA-FAMILY ATPASE 37 696 - -
Amo16g0861 975 PANTHER PEROXISOME ASSEMBLY FACTOR 2 707 971 - -
Amo16g0861 975 SMART AAA_5 376 548 IPR003593 -
Amo16g0861 975 SMART AAA_5 725 865 IPR003593 -
Amo16g0861 975 Gene3D - 863 949 - -
Amo16g0861 975 Pfam ATPase family associated with various cellular activities (AAA) 380 543 IPR003959 GO:0005524|GO:0016887
Amo16g0861 975 Pfam ATPase family associated with various cellular activities (AAA) 729 861 IPR003959 GO:0005524|GO:0016887
Amo16g0861 975 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 349 612 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0861 Amo-Chr16 13824359 13830209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0861 722 928 Calmodulin-binding Proteins AT3G56690 40.865 3.11e-40 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0861 K13339 - gmx:100820183 1389.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0861 16 13824359 13830209 Amo06g0347 06 4969529 4974408 hybridization