Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0824 ATGGGGAAGAAGAAGCAGAAGGAGAAGATAGTTCTTCCACCGGAGCTCCCGCCGGAGATTCCCGACGACGAGGTTGAGGTCTCCGATGAGGACCTCCAGTTCGTCAATGAGAATCGCGGTTACGCTTCCTTATTCTCCACCCTTGACACGCAATCAATCACCAAGCATGTTACTCGAGTTGCTGATGCTAAAGATGATGCTTTGGAGAAACTTTATGAGAAACGGCTGCGAAAGAATGCTCTCAAGAAGGAAAAAGAAGAAACAGGAATACAGGTTGACCGAGTTGATGTTCTTCCAATCAAGTCTTTGGATGGACAACTCCATTACCGGACAGCTACAAAGGCAGAATCACAAAATGGTCCAAGTGAAGAGGAAACGGGAGAGGATGTAAATGATAGAAAAAGTCTGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAGTTGAGGAAGGAGGGGAAAAAGCAAGGGAAAGAGGTGCCAAAAGCAGAAGTGGAACAAACACCACAAGCCACTGTACTGGCTGAGGTAAAAGAAGATCTTACAACTGAGGAGGTTTTTGAATCTAAGAAGTGTAAACTTGCAGAGTTGGGAAATGCATTACTTACAGACCCTGAGTCCAATATTAAATTTCTGAAGGATATGCTACAGATATCTAAAGACAATGATCCTACCATTGTTAAACTTGGACTTCTGTCACTCTTGGCTGTATTTAAAGATATTGTCCCTGGCTATCGAATAAGGCTTCCTACTGAGAAAGAACTGGAAATGAAGGTTTCAAAGACTGTGAGAAAGATGCGTTACTATGAATCAACTCTACTTTCGGCATACAAGGCATACCTGCAAAGGCTGATGTACTTAGAAAAGAAGCCCTTATTTCAACTTGTAGCAGTACGTTGTATTTGTACATTGCTCGACATACATCCTCATTTCAACTTCAGGGAAAACCTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTAATGAGGCCATAAGGAAACTTTGTTGTTCTACAGTTAAATCATTGTTTACAAATGAGGGTAAACATGGTGGTGAGGCTACTGTAGAGGCTGTTCGATTGATTGCCGATCTTGTCAAGGCTAATAATTGTCAGTTGCATCCTGATTCTGTTGAGGTGTTTTTGTCTCTTTCATTCGATGAGGATCTTGGGAAGACTGAGAAGAAAGACGAGGATCAGAAATTTAAAAACAAGAAAAATAAGAAGAGAAAAAACATGGAGGCATCAAATCAGTTGCCAGATAATGATAGAAAGAGAAGTAAGCATGAAATGATCTCTAAGACAAAAGAGGAGGTTGAAGCTGAGTACAAGGCTGCATCGTTTGCCCCAGATGTTATGGAGAGGAGACAAATGCAATCTGAAACACTCTCTGCCGTGTTTGAGACGTATTTTCGCATTTTGAAGCACACGATGCATTTTATAGCAACCAGGCCTGAAGTAAATACTGGGGCATCATCTGCTGCAGTGGAATCCCATCCATTGTTTGCTCCTTGTCTCAAAGGACTGGGAAAGTTTTCACATTTGATTGACCTCGACTTCATGGGGGACCTAATGAACCATCTCAAAGTACTTGCTTCTGATGGTAGTAACTCTGGCAACAGTTCTGAGAAGTGTCCTAAATTTTTGACTGTGACCGAACGTCTCCAATGTTGCATTGTTGCTTTTAAAGTGATGAGGAATAATCTTGATGCTCTGAATGTTGATTTGCAAGACTTCTTCGTCCATCTTTACCGTCTTATACTTGAATACAGGCCTGGAAGAGATCAAGGAGAGGTGTTAGCAGAAGCTTTGAAGATAATGTTGTGTGAAGATAAGCAACATGACATGCAAAAGACTGCTGCATTCATAAAGCGTTTGGCTACATTGTCGCTGTGCTTTGGATCTGCTGAGTCCATGGCTGCATTGGTCACAGTAAGGCATCTCCTTCAAAAGAATGTGAAGTGCAGAAATCTGTTGGAAAATGACACTGGAGGGGGCTCAGTTTCCGGAACAATCCCAAAATATCAACCATATTCCACGGATCCCAATTTAAGTGGAGCTCTTGCTTCTGTGCTTTGGGAACTCAATCTTTTGTCCAAGCATTATCATCCTTCTATATCAACAATGGCCTCTGGTATATCAAGCATGAGTGTTGCACAGAATCAAGTCATTCTCTCAAAAACCTCTCCTACACAAGCTTTAATGGAAATGTCTCTTGATCAGGAATTAACTTTCCCGCAACATAGTGGCACTATAAAATTGAATAACAAGAAGAGAAGAACAAATGGTCCTGCAACATCACCCTCCATTGGTTCTGCATCAGTCACTTCAAGTTCATTCAATGAGGATGAGTTGCATGAGAAACTTGGTTCCCATTTTACGCTTCTTCGCGACATTAGGGAGAATGAAAGGTTGAGAAAGGAGTTGGATAAGACTACACTATCACTACAGCTATATGAACAATATAAGAAACAAAAGCAAAGATCAAAACCAAAGAAGAAAGCCATTGCTTAA 2520 0.4131 MGKKKQKEKIVLPPELPPEIPDDEVEVSDEDLQFVNENRGYASLFSTLDTQSITKHVTRVADAKDDALEKLYEKRLRKNALKKEKEETGIQVDRVDVLPIKSLDGQLHYRTATKAESQNGPSEEETGEDVNDRKSLVKLTKAEKRAKLKKLRKEGKKQGKEVPKAEVEQTPQATVLAEVKEDLTTEEVFESKKCKLAELGNALLTDPESNIKFLKDMLQISKDNDPTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKAYLQRLMYLEKKPLFQLVAVRCICTLLDIHPHFNFRENLLDATVRNISSTNEAIRKLCCSTVKSLFTNEGKHGGEATVEAVRLIADLVKANNCQLHPDSVEVFLSLSFDEDLGKTEKKDEDQKFKNKKNKKRKNMEASNQLPDNDRKRSKHEMISKTKEEVEAEYKAASFAPDVMERRQMQSETLSAVFETYFRILKHTMHFIATRPEVNTGASSAAVESHPLFAPCLKGLGKFSHLIDLDFMGDLMNHLKVLASDGSNSGNSSEKCPKFLTVTERLQCCIVAFKVMRNNLDALNVDLQDFFVHLYRLILEYRPGRDQGEVLAEALKIMLCEDKQHDMQKTAAFIKRLATLSLCFGSAESMAALVTVRHLLQKNVKCRNLLENDTGGGSVSGTIPKYQPYSTDPNLSGALASVLWELNLLSKHYHPSISTMASGISSMSVAQNQVILSKTSPTQALMEMSLDQELTFPQHSGTIKLNNKKRRTNGPATSPSIGSASVTSSSFNEDELHEKLGSHFTLLRDIRENERLRKELDKTTLSLQLYEQYKKQKQRSKPKKKAIA* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0824 839 MobiDBLite consensus disorder prediction 748 780 - -
Amo16g0824 839 MobiDBLite consensus disorder prediction 148 169 - -
Amo16g0824 839 MobiDBLite consensus disorder prediction 413 438 - -
Amo16g0824 839 MobiDBLite consensus disorder prediction 110 136 - -
Amo16g0824 839 PIRSF Noc3 1 815 IPR016903 -
Amo16g0824 839 MobiDBLite consensus disorder prediction 397 438 - -
Amo16g0824 839 Pfam Nucleolar complex-associated protein 192 282 IPR011501 -
Amo16g0824 839 SUPERFAMILY ARM repeat 211 589 IPR016024 -
Amo16g0824 839 MobiDBLite consensus disorder prediction 1 23 - -
Amo16g0824 839 Pfam CBF/Mak21 family 557 712 IPR005612 -
Amo16g0824 839 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 782 IPR016903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0824 Amo-Chr16 13231734 13239359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0824 1 811 Core DNA Replication Machinery Family AT1G79150 58.049 0.0 917
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0824 K14834 - gmx:100776136 1244.95