Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0817 ATGTCTATCGGTTTATTGAAGAATGTTCAAGACCTGTTGCTTAAACGGTTGCTCGTTATATTCTGCTTGTTGTTTGTTATTGAGTCTGGTGCAAGTGATATAGGACGCCAACCCCCATCGTTAGCTTCAGACAGATCACTACTAGTAGATGACCACGGGTCGAAGCATTTCTCCTTTCATGGTACACCAGTTGTAGCAGTTTCACCAGCCAATCCTCCTTCATATGGTCCTTTTATGAGTACTAGTCATCCCCCTGGAAGTTCACATTTCTCCGTACCATTCAAGAAGAAGACTGAATTACAACCTCCGATTTCTGGATTTAAAGATATTGCTCCTGTACATTCTGCTGGAGCTGCAACTCCTTCTGCTTTGGCTCAGCCACCATTGGCCCCTTATGTTTCCAATTGTTGTAAACAAGACATGGTATTGAAACGAGGCAGTAAGAGTTGCCAGTGTGTGTATCCAATAAAGCTAGACCTTCTGCTTTTGAATGTTTCTCAAAGTCGTACTTGGAATGATTTTCTTGATGAGTTAGCTACTCATCTTGGGCTACGCAGCACCCAGATTGAGCTGATAAATTTCTATGTAATCGGTTTATCAACATTAAATATGTCAATGGATATTACACCATATAAAGGGATCGGTTTCTCTGCCAGCGAAGCAGCTAGGATAAACTCGTCACTTTCAATGCATAAGATTCAACTGGACCCTAAATTAGTGGGTGACTACAAAGTCATCAATATAACTTGGTTTCAACCACCGCCTCCTTCTCCAGCTCCTGCTTTTGCTGCATCACCTGTGAATACTCCTCTGTATCACTCACCTACTGCTGAATCATCAAGTTCATCAAATAGTGGAAGGCATTCAAATTTGTTTCTTATACTTGGAATTGCTATAGGCTTACTCTTCATTGCGATCATATCTATACTTGTACTTTGTTTATGTACATTGTTGCCGAAGGCAAAAGAACCTCCTGTTGAAAGTGAAAAGCCGAGGACAGAAAGTACTGTTTCAGCTGTGGGTTCGCTTCCCCATCCATCTAGCACAAGGTTTATTGCATATGAAGAACTTAAAGAGGCAACAAACAATTTTGAACCTGCAAGTGTACTTGGAGAAGGAGGGTTTGGTAGAGTTTTTAAAGGTGTCTTAAATGATGGTACTGCTGTAGCAATAAAGAGACTCACTAGTGGAGGGCAACAGGGTGACAAAGAGTTTCTTGTTGAGGTTGAGATGCTTAGCCGGTTGCATCATCGTAACCTTGTAAAACTAGTGGGATATTATAGCAATCGGGATTCATCTCAAAATCTACTTTGTTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCCTGGCTTCATGGTCCCTTGGGAATCAATTGTCCTTTGGATTGGGACACCAGAATGAAGATTGCGCTCGATGCTGCAAGAGGACTTTGTTACCTCCATGAAGACTCACAACCCTGTGTGATACACAGAGACTTCAAGGCATCGAACATATTGCTTGAGAACAACTTTCATGCTAAAGTAGCAGATTTCGGTCTTGCTAAGCAAGCACCTGAAGGCAGAGCTAATTACTTGTCTACTCGTGTCATGGGAACTTTTGGGTATGTAGCTCCTGAGTATGCCATGACCGGGCACCTTCTTGTTAAGAGTGATGTCTATAGCTACGGGGTTGTCTTGCTGGAGCTGCTTACTGGAAGGAAACCTGTGGACATGTCGCAGCCAACTGGACAAGAGAACCTTGTAACTTGGGCTAGGCCAATCCTTAGAGACAAGGACAGGTTGGAAGAGATCGCTGATCCAAAACTTGGGGGAAAGTATCCAAAGGAAGATTTTGTACGTGTTTGCACCATTGCTGCTGCTTGTGTTGCTCCTGAAGCAAACCAACGACCAACAATGGGTGAAGTGGTGCAGTCACTTAAAATGGTGCAGCGCATCACAGAATACCAGGATTCCATGATACCCTCATCCAATACACGGGCAAACCTGAGACAGTCCTCTAGCACTTTTGAGTTTGATGGAACATCTTCAATGTTCTCTTCAGGTCCTTACTCTGGTCTAAGTGCCTTTGAGAACGAAAATGTTTCTAGGACTGCAGTTTTCTCTGAAGATCTTCATGAAGGACGATGA 2127 0.4311 MSIGLLKNVQDLLLKRLLVIFCLLFVIESGASDIGRQPPSLASDRSLLVDDHGSKHFSFHGTPVVAVSPANPPSYGPFMSTSHPPGSSHFSVPFKKKTELQPPISGFKDIAPVHSAGAATPSALAQPPLAPYVSNCCKQDMVLKRGSKSCQCVYPIKLDLLLLNVSQSRTWNDFLDELATHLGLRSTQIELINFYVIGLSTLNMSMDITPYKGIGFSASEAARINSSLSMHKIQLDPKLVGDYKVINITWFQPPPPSPAPAFAASPVNTPLYHSPTAESSSSSNSGRHSNLFLILGIAIGLLFIAIISILVLCLCTLLPKAKEPPVESEKPRTESTVSAVGSLPHPSSTRFIAYEELKEATNNFEPASVLGEGGFGRVFKGVLNDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLCYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEEIADPKLGGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYQDSMIPSSNTRANLRQSSSTFEFDGTSSMFSSGPYSGLSAFENENVSRTAVFSEDLHEGR* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0817 708 ProSitePatterns Protein kinases ATP-binding region signature. 370 392 IPR017441 GO:0005524
Amo16g0817 708 SUPERFAMILY Protein kinase-like (PK-like) 339 641 IPR011009 -
Amo16g0817 708 ProSiteProfiles Protein kinase domain profile. 364 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0817 708 Gene3D Phosphorylase Kinase; domain 1 327 441 - -
Amo16g0817 708 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 48 708 - -
Amo16g0817 708 PANTHER OS01G0750732 PROTEIN 48 708 - -
Amo16g0817 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 488 500 IPR008271 GO:0004672|GO:0006468
Amo16g0817 708 Gene3D Transferase(Phosphotransferase) domain 1 442 662 - -
Amo16g0817 708 Pfam Protein tyrosine and serine/threonine kinase 368 639 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0817 Amo-Chr16 13106504 13111559 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0817 12 708 Receptor kinase-like Gene Family AT4G02010 67.090 0.0 960
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Amo16g0817 PK_Tyr_Ser-Thr 3.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0817 - - gmx:100793528 1146.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0817 16 13106504 13111559 Amo16g0817 16 13106504 13111559 ECH