Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0772 ATGAACCCTTTGTTGGAGTTGGTTGGCGTGGCAAGAACGACTTTGGAGATTGAGTTGACTATGTTTTTGACTTTTTGCTCGAGAGTTGAATCTTATCTTTCACTGAAAAGAGTGTTTTCTGGGAAGCTAAGTTATGAATGCATGGGAACCAAAATTTGTTCGGCTACATTTATATTTATCTTCAGGTTTGAAGACTGGAGGTCAACATCATCGGAACAAGAGAGTTCTGTTAATAATGGATATAATGAAAGAAAAGGTATGCCAAGTGTAGGTGCTGTTTTGAAGAGTATTGGAAGAAAACTGGAGAGTGGTTCAGAAAAGTTCAAGAACTTGAGGAAGCCTTCAACTGTTCATCCTGTAAGTGATAGACCAAAAGAGAAACTGGCTTCTAGAAGAAGCAACATTCTTGATCCACAAGGACGAACCCTTGAAAAATGGAACAAGATTTTTGTGATCACATGTGTGATGGCAATCTCCGTGGATCCGCTCTTCTTTTACATTCCAGTGATCAATGACAAAAAGAAATGTCTGAATTTGGATGGCACGTTGCGAATCACCACTAGTGTTCTTCGAACATTCTTTGATCTTTTCTACATTCTTCGCATAATCTTTCAGTTTCGAACAGGGTTTATTGCCCCGTCTACTCGTGTTTTTGGAAGGGGTGAGGTGAACAACAATCCGGTGGCTATAATGAAAAGATACTTAAGTTCATACTTCATCATTGACATCCTCTCTATTATTCCAATTCTGCAGGTGCTGGTTTTAGCTGTAACTCCAAAGATGAAAAGCTCACCGTTTTTAGCAAAGGACTTGTTGAAGTATGTAATATTGGTCCAATATGTGCCAAGACTTCTGCGGATATGGCCATTATTCAGAGAAGTAACGAGAACTTCTGGTATATTGACCGAGACTGCATGGGCTGGAGCTGCTTTTAATCTTGGTCTTTATATGCTAGCAAGTCATGTTGTTGGAGCTAACTGGTATATGCTTTCAGTAGAATCAGAGGCAAGATGCTGGCGCAAAGTGATGGAAAATGATAGGCACTTTAAAGATTCATACCTGGGCTGTGGACCTAATAGAGAATTTGTCATATTACTTCTCAGTAAAAATACTACTTGCTCTTTCATTGACCCTGATCAAAACCAAGACCCAAATGCCTTTGATTTTGGAATATTCAATGATGCTTTAGAATCATCTGTGGTGAATTCCGAAACAGATTTTCTTAAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTACGCAATTTGAGTTCTGTTGGACAAAACCTCAAGACAAGCACCTACATTGTGGAGATACTCTTTGCCATCTTCATAGCCATTGCTGGATTGGTTTTATTTGCGTTACTTATTGGAAACATGCAGAAATATTTGCAATCAACAACTGTTAGAGTTGAGGAGATGAGAGTCAAGAGGCGCGACGCAGAAAGATGGATGTCTCATCGTATGCTTCCTGAGAGACTGAGGGACAGAGTTAGACGGTATGAACAATACAAATGGCAACAAAATAGGGGTGTTGAGGAGGAGGCATTAATTCGCACCCTCCCTAAAGATCTAAGGAGGGACATAAAGCGTCATCTCTGCTTGGCTTTAGTTAAAAAAGTGCCAATATTTGAGAAAATGGATGAGCAGTTGTTGGATGCAATGTGTGATAGACTGAAGCCGGTCCTGTATACAGAAAAGAGCTACATTGTTCGCGAAGGAGATCCGGTTGATGAGATGCTTTTTGTCATGCGTGGAAAGCTCGCTTCTATGACAACAAACGGTGGAAGAACTGGTTTCTTCAACTACACGGTTCTTGAGGCCGGTCAGTTCTGTGGCGAGGAGCTGTTAACATGGGCCCTGGATCCTCACTCCTCCACAAATCTTCCCACCTCAACCAGAACAGTAGAAACCATATCAGAAGTTGAAGCCTTTGCTCTCATGGCCGATGATTTGAAGTTTGTTGCTTCCCAATTTCGACGTCTTCAGAACAAACAACTTCAGCACACTTTCAGGTACTATTCGATGCAATGGAAGACATGGGCTGCCTGTTTCATACAAGTAGCATGGCGTCGATACTGGAAAAAGAAGGTTGAGAGGCAATTACGCGAAGCAGAAGACAGGCTACAAGGTGCCTTTGTAAATGAGGATGAATCCTCTCTAAGCCTTGGTGCAACCATATATGCATCACGGTTTGCTGCTAATGCATTGAGAAACTTGAGAGAAAACAGCGAACGCAACAAGAGAATGCCACAGAGACTACCTCTGCTTCCTCCAAAGCCCGCTGAGCCAGATTTCTCTACTCAGGAACACTAG 2313 0.4176 MNPLLELVGVARTTLEIELTMFLTFCSRVESYLSLKRVFSGKLSYECMGTKICSATFIFIFRFEDWRSTSSEQESSVNNGYNERKGMPSVGAVLKSIGRKLESGSEKFKNLRKPSTVHPVSDRPKEKLASRRSNILDPQGRTLEKWNKIFVITCVMAISVDPLFFYIPVINDKKKCLNLDGTLRITTSVLRTFFDLFYILRIIFQFRTGFIAPSTRVFGRGEVNNNPVAIMKRYLSSYFIIDILSIIPILQVLVLAVTPKMKSSPFLAKDLLKYVILVQYVPRLLRIWPLFREVTRTSGILTETAWAGAAFNLGLYMLASHVVGANWYMLSVESEARCWRKVMENDRHFKDSYLGCGPNREFVILLLSKNTTCSFIDPDQNQDPNAFDFGIFNDALESSVVNSETDFLKKFFYCFWWGLRNLSSVGQNLKTSTYIVEILFAIFIAIAGLVLFALLIGNMQKYLQSTTVRVEEMRVKRRDAERWMSHRMLPERLRDRVRRYEQYKWQQNRGVEEEALIRTLPKDLRRDIKRHLCLALVKKVPIFEKMDEQLLDAMCDRLKPVLYTEKSYIVREGDPVDEMLFVMRGKLASMTTNGGRTGFFNYTVLEAGQFCGEELLTWALDPHSSTNLPTSTRTVETISEVEAFALMADDLKFVASQFRRLQNKQLQHTFRYYSMQWKTWAACFIQVAWRRYWKKKVERQLREAEDRLQGAFVNEDESSLSLGATIYASRFAANALRNLRENSERNKRMPQRLPLLPPKPAEPDFSTQEH* 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0772 770 Gene3D Jelly Rolls 540 660 IPR014710 -
Amo16g0772 770 Pfam Cyclic nucleotide-binding domain 562 652 IPR000595 -
Amo16g0772 770 Pfam Ion transport protein 146 470 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo16g0772 770 Gene3D Helix hairpin bin 469 533 - -
Amo16g0772 770 SUPERFAMILY cAMP-binding domain-like 471 666 IPR018490 -
Amo16g0772 770 ProSiteProfiles cAMP/cGMP binding motif profile. 542 626 IPR000595 -
Amo16g0772 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 58 768 - -
Amo16g0772 770 CDD CAP_ED 542 673 IPR000595 -
Amo16g0772 770 SUPERFAMILY Voltage-gated potassium channels 137 464 - -
Amo16g0772 770 Gene3D - 148 466 - -
Amo16g0772 770 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 58 768 - -
Amo16g0772 770 MobiDBLite consensus disorder prediction 742 770 - -
Amo16g0772 770 SMART cnmp_10 542 673 IPR000595 -
Amo16g0772 770 Coils Coil 694 714 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0772 Amo-Chr16 12316704 12320070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0772 62 769 Ion Channels AT5G53130 62.657 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0772 K05391 - gmx:100797784 1055.43