Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0761 ATGGAATATGCTGAGAATGGGGAACATGGTCTCATCAATGAACTCATCCAAGGGAAGGAGCTAGCAAAGCAGCTATGCAATCTTCTCTCTTCTTCTTCTTCTTCTTCATCCAAAGAAATCTTAATTGACAAGATACTTTCCACCTATGAGAAAGCCCTCACCATGCTCAACTCTGACTCCACCATTCCCAATCTCATTAATTCCCATTCTTCTTCTTCTTCTATAAATGGGAGCCCTTCAAGGAGTGACCTCATTGATAATGATGAAGAATTCAAGGACAAACCCCCCCTCAAGAAGAGGAAGACTATGCCCAAATGGACAGAGAAAGTGAAAGTATGTTCAAAAACAGGACTTGAGGGATCTTTGGATGATGGGTATAGCTGGAGAAAATATGGACAAAAGGATATTCTTGGAGCCAAGTTCCCAAGAGGATATTACAGATGCACATACAGAAATGTACAAGGGTGCCTTGCAACAAAACAAGTTCAAAGATCAGATGTAGACCCAACAATGATTGAGGTGAACTACAGAGGAAGACACACGTGCACCCAATCTAAGCATTCCAACAAAGCGTTTCCATCAAAAACAATGTTGCCAGTGTTGGAGAAGAACCAATTCCACAAGTTCCAAAACAACCAACCTCAAAAGCAGGAGAAAATGGAACAAACCCAAGAGGAAATTTTCAACTTTGAAGCAAAGCTTGAGTTGGACACTAACACCAACATCACAACCAAGGATGATGATATCTTCCCATGGTTCTGCTACCTTTCTCCTTCAATGGGATCCGAAAACGATGATAACGACATGTTGTTATCTGATTCCATGTTCTTGGAAAGCTTTTCCCCTGATATAGCATCATTCATATCACCATCAACTTCAGAATCAAACCTTTTCTGTTTATCACCATGCCAATTTGGAAGCAGCAATAATAATGGAATAGTCCAAGCCTCAGAATCTGATATAACTGAGATACTTTCAGCTCCAACCTCAGTAACCAATTCTCCAATCATGGATTTCGATATGCTGCTTGATAAACTGGATTTCGACACCATATTCCCTTCCAACACAACGGAAATTTCCTCTTCATGA 1089 0.405 MEYAENGEHGLINELIQGKELAKQLCNLLSSSSSSSSKEILIDKILSTYEKALTMLNSDSTIPNLINSHSSSSSINGSPSRSDLIDNDEEFKDKPPLKKRKTMPKWTEKVKVCSKTGLEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQRSDVDPTMIEVNYRGRHTCTQSKHSNKAFPSKTMLPVLEKNQFHKFQNNQPQKQEKMEQTQEEIFNFEAKLELDTNTNITTKDDDIFPWFCYLSPSMGSENDDNDMLLSDSMFLESFSPDIASFISPSTSESNLFCLSPCQFGSSNNNGIVQASESDITEILSAPTSVTNSPIMDFDMLLDKLDFDTIFPSNTTEISSS* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0761 362 ProSiteProfiles WRKY domain profile. 117 180 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g0761 362 MobiDBLite consensus disorder prediction 68 99 - -
Amo16g0761 362 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 2 352 - -
Amo16g0761 362 SUPERFAMILY WRKY DNA-binding domain 121 184 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g0761 362 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 352 IPR044810 GO:0003700
Amo16g0761 362 MobiDBLite consensus disorder prediction 83 99 - -
Amo16g0761 362 Gene3D WRKY domain 108 185 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g0761 362 SMART WRKY_cls 122 184 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g0761 362 MobiDBLite consensus disorder prediction 68 82 - -
Amo16g0761 362 Pfam WRKY DNA -binding domain 123 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0761 Amo-Chr16 12159530 12161440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0761 12 288 WRKY Transcription Factor Family AT5G24110 37.063 5.34e-52 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo16g0761 WRKY 7.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0761 - - gmx:100790050 361.303