Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0717 ATGGCTCCCGATGCTTCCGACGCTCTCGCAGTGAGGCAGAAAGTTCAGCAATTTCTGAACGCTGCTCGCACCGGCAATCTTGATCTCCTCAAGAATTTAGCGACTCAGTTGGATGAGTCCAAGGATTTGGCCAAGACCGTGGACTCAATTAAGGACGCAAACAAGCGAGGAGCCCTGCACTTCGCCGCCCGCGAAGGCCAGACCGAGGTTTGCAAGTACTTGCTTGAGGAATTGAAGCTCCATGTCGATTCAAAAGACGATGATGGGGAAACTGCTCTCATTCATGCTGCTCGTCAGGGGCACACTGCCACTGCTAAATATCTCATTGACCGTGGTGCTAATCCTACCATAGCTAGCAATTTAGGGGCTACGGCCTTGCACCATTCTGCAGGGATAGGGGATACTGAGCTGCTCAAGCATTTGCTTTCTACAGGAATTAATCCTGATTTGGAAAGTGATGCCGGAACGCCTTTGGTTTGGGCTGCCGGTCATGGCCAACAAGCTGCCGTCAGTGTTCTACTAGAACATGGTGCAAATCCTAATGCTGAAACCGATGATGGTATTACCCCACTCCTTTCATCTGTGGCAGCCAGCTCGCTGGCATGCTTAGAGGAGTTAATTCAGGCAGGTGCGAAAGTAAATATTAGTGCCGGTGGAGCAACTCCTTTACACATTGCAGCTGATAATGGCAGTCTGGAAATTATAAATTGCTTATTGAAAGCTGGAGCTGATCCTAATGTGTCCGATGAGGTGAGAGACAGATATTGTGTTATCTTTTTCGCTCATCACCATCTTTTTTTAGGAGCTTAG 810 0.4864 MAPDASDALAVRQKVQQFLNAARTGNLDLLKNLATQLDESKDLAKTVDSIKDANKRGALHFAAREGQTEVCKYLLEELKLHVDSKDDDGETALIHAARQGHTATAKYLIDRGANPTIASNLGATALHHSAGIGDTELLKHLLSTGINPDLESDAGTPLVWAAGHGQQAAVSVLLEHGANPNAETDDGITPLLSSVAASSLACLEELIQAGAKVNISAGGATPLHIAADNGSLEIINCLLKAGADPNVSDEVRDRYCVIFFAHHHLFLGA* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0717 269 Gene3D - 194 261 IPR036770 -
Amo16g0717 269 Gene3D - 10 121 IPR036770 -
Amo16g0717 269 ProSiteProfiles Ankyrin repeat profile. 121 153 IPR002110 GO:0005515
Amo16g0717 269 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 1 254 - -
Amo16g0717 269 ProSiteProfiles Ankyrin repeat region circular profile. 88 114 - -
Amo16g0717 269 ProSiteProfiles Ankyrin repeat profile. 153 185 IPR002110 GO:0005515
Amo16g0717 269 ProSiteProfiles Ankyrin repeat profile. 88 120 IPR002110 GO:0005515
Amo16g0717 269 ProSiteProfiles Ankyrin repeat profile. 218 250 IPR002110 GO:0005515
Amo16g0717 269 PRINTS Ankyrin repeat signature 122 137 IPR002110 GO:0005515
Amo16g0717 269 PRINTS Ankyrin repeat signature 169 183 IPR002110 GO:0005515
Amo16g0717 269 SUPERFAMILY Ankyrin repeat 19 250 IPR036770 -
Amo16g0717 269 Gene3D - 122 193 IPR036770 -
Amo16g0717 269 ProSiteProfiles Ankyrin repeat profile. 186 218 IPR002110 GO:0005515
Amo16g0717 269 ProSiteProfiles Ankyrin repeat region circular profile. 121 153 - -
Amo16g0717 269 Pfam Ankyrin repeats (3 copies) 186 249 IPR002110 GO:0005515
Amo16g0717 269 Pfam Ankyrin repeats (3 copies) 20 117 IPR002110 GO:0005515
Amo16g0717 269 Pfam Ankyrin repeats (3 copies) 122 182 IPR002110 GO:0005515
Amo16g0717 269 ProSiteProfiles Ankyrin repeat region circular profile. 218 250 - -
Amo16g0717 269 SMART ANK_2a 54 84 IPR002110 GO:0005515
Amo16g0717 269 SMART ANK_2a 218 247 IPR002110 GO:0005515
Amo16g0717 269 SMART ANK_2a 153 182 IPR002110 GO:0005515
Amo16g0717 269 SMART ANK_2a 88 117 IPR002110 GO:0005515
Amo16g0717 269 SMART ANK_2a 186 215 IPR002110 GO:0005515
Amo16g0717 269 SMART ANK_2a 121 150 IPR002110 GO:0005515
Amo16g0717 269 ProSiteProfiles Ankyrin repeat region circular profile. 153 182 - -
Amo16g0717 269 PANTHER BNAC03G33870D PROTEIN 1 254 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0717 13 249 Ion Channels AT4G32500 28.033 1.03e-15 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0717 - - gmx:100798118 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0717 16 11552209 11553877 Amo16g0717 16 11552209 11553877 ECH