Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0710 ATGGGAGACGAGACGAGTCCTGAGTGGATGAACAAGGGAGACAATGCATGGCAGCTGATGGCGGCAACAATGGTGGGGATGCAAACAATTCCAGGGCTAGTAATCTTGTACGGAAGCATGGTGAGCAGGTCATGGGCCATCAACTCGGCCTTCATGGCCTTATACGCTTTCTCCGCCGTGTTCGTTTGTTGGGCCAGCTGGGCTTACCGCATGTCGTTCGGCGAAGAATGGGTGTTTTTCTTGGGCAAGCCGGCGGTGGCGTTGGACGAGAAATTCCTTCTAGGGAAGTCGTTTCTGGGAGCGTTCCCTACTGCAACGATGGTGTTCTTTCAAGGAGTATTTGCGGCCATTACTCTGGTTCTTATTGGCGGTTCATTGCTSGGAAGAATGAACTTCCGTGCATGGATGCTGTTTGTTCCTCTCTGGCTTACATTTTCATACACGATCACTGCTTTCAGTATTTGGAGCCCGAATGGGTGGTTATTTAARCTTGGAGTTATTGACTTTGCTGGTGGCCTTGTTATTCATGTCTCTGCTGGTGTTGCTGGCATTACCGCAGCTTTTTGGGTGGGTCCAAGATCAGAGAAGGAAAGAGAAGCATTTGCTTCAAATAATATGATTGTAGCATTGGGAGGTGCGGGCTTGGTTTGGATGGGGTGGTCAGGCTTCAACGGCGGTGCTCCGCTTGCTGTGAACACACTTGCATCTCTCGCAATTCTAAACACTCATGTCTGCGCTGCTACTAGCATCGTCACATGGCTCGTCCTCGACAGTTTATGTTTCGGTAAGCCAACCATGTTTGGCGCCATTCAAGGCTTGATCACCGGCCTTGTTTGCATTACCCCCGCCGCAGGAGTAGTGCAAGGTTGGACAGCAATTTTGATGGGTTTGTTCTCAGGAAGTGTACCATGGTACACATTGATGGTGCTTCACAAGAAGCTCAAATTCTTAAACAAAATAGATGATCCAATGGCCATTTTTCACACACATGCCATAACCGGAATTCTTGGTGGAATTCTAACAGGCTTATTTGCTGTTCCTAAATTGTGTCGCCTCTTCTATGGAGTGCCTGATTGGAAGAAATACACTGGACTCTTTTATGGCCTTAAAAATGGTTTAGCCCATGCTGGTTTGACTCAGTTGGGGATCCAACTTGAAGCCACTATTTTTGTAGTTGTATTTAATGTTATTAGTACAACCGTGATATGCTTGGTTGTGAGGAGCATAGTGCCATTAAGGGTTGATGATGAGGATGCATTGCAAGTAGGTGGTGACAAAAGCATGCATGGAGAAGAGGCATTTGCCTTGTGGTGTTCCCATCAGGATAAGGATACCAAGTTTGAGAATGTAAAGCAAAACAAAGTTTATGACACAAAAGATTTTTCGTCCTCCATTGACGAATCATCAACCAAGAAGGCTTCTAGTGAAGTTCAAATGGTTTGA 1443 0.4636 MGDETSPEWMNKGDNAWQLMAATMVGMQTIPGLVILYGSMVSRSWAINSAFMALYAFSAVFVCWASWAYRMSFGEEWVFFLGKPAVALDEKFLLGKSFLGAFPTATMVFFQGVFAAITLVLIGGSLLGRMNFRAWMLFVPLWLTFSYTITAFSIWSPNGWLFKLGVIDFAGGLVIHVSAGVAGITAAFWVGPRSEKEREAFASNNMIVALGGAGLVWMGWSGFNGGAPLAVNTLASLAILNTHVCAATSIVTWLVLDSLCFGKPTMFGAIQGLITGLVCITPAAGVVQGWTAILMGLFSGSVPWYTLMVLHKKLKFLNKIDDPMAIFHTHAITGILGGILTGLFAVPKLCRLFYGVPDWKKYTGLFYGLKNGLAHAGLTQLGIQLEATIFVVVFNVISTTVICLVVRSIVPLRVDDEDALQVGGDKSMHGEEAFALWCSHQDKDTKFENVKQNKVYDTKDFSSSIDESSTKKASSEVQMV* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0710 480 Gene3D Ammonium transporter AmtB like domains 2 454 IPR029020 -
Amo16g0710 480 PANTHER AMMONIUM TRANSPORTER 2 479 - -
Amo16g0710 480 PANTHER AMMONIUM TRANSPORTER MEP2 2 479 IPR001905 GO:0008519|GO:0016020|GO:0072488
Amo16g0710 480 PRINTS Rhesus blood group protein signature 111 127 IPR002229 GO:0005887
Amo16g0710 480 PRINTS Rhesus blood group protein signature 207 225 IPR002229 GO:0005887
Amo16g0710 480 PRINTS Rhesus blood group protein signature 238 260 IPR002229 GO:0005887
Amo16g0710 480 PRINTS Rhesus blood group protein signature 331 347 IPR002229 GO:0005887
Amo16g0710 480 TIGRFAM amt: ammonium transporter 14 433 IPR001905 GO:0008519|GO:0016020|GO:0072488
Amo16g0710 480 Pfam Ammonium Transporter Family 17 434 IPR024041 GO:0008519|GO:0016020|GO:0072488
Amo16g0710 480 ProSitePatterns Ammonium transporters signature. 168 193 IPR018047 GO:0008519|GO:0016020|GO:0072488
Amo16g0710 480 SUPERFAMILY Ammonium transporter 9 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0710 Amo-Chr16 11443101 11445694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0710 105 452 Inorganic Solute Cotransporters AT2G38290 52.874 9.37e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0710 K03320 - gmx:100782944 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0710 16 11443101 11445694 Amo16g0710 16 11443101 11445694 ECH