Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0702 ATGGCTCCAAAGAAGGATAAGGCTCCTCCACCATCTTCCAAGCCCGCCAAATCTGGTGGTGGCAAGCAAAAGAAGAAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCGCTTGCAAGGAGGGCTATAAGAGAGTTGATGGCTAGAGGTTCGATTAGACTGGTCTCTGCCCACGCAAGTCAGCAGATTTACACAAGAGCAACAAACACCTAG 327 0.474 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRINGSLARRAIRELMARGSIRLVSAHASQQIYTRATNT* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0702 108 Pfam S25 ribosomal protein 7 105 IPR004977 -
Amo16g0702 108 PANTHER BNAA04G12260D PROTEIN 2 108 - -
Amo16g0702 108 MobiDBLite consensus disorder prediction 1 38 - -
Amo16g0702 108 Gene3D - 21 108 - -
Amo16g0702 108 PANTHER 40S RIBOSOMAL PROTEIN S25 2 108 IPR004977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0702 Amo-Chr16 11336609 11338457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0702 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.523 2.55e-55 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0702 K02975 - gmx:100786842 157.532