Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0691 ATGGAGCAGTATGAAGTACTTGAGCAAATTGGAAAAGGTGCTTTTGGTTCTGCACTTCTTGTCAAGCATAAGCATGAGAAGAAAAAATATGTTCTGAAGAAGATTCGCCTTGCCCGTCAAACTGAGCGTTCCCGCAGGTCTGCACACCAGGAGATGGAGCTCATTTCCAAATTAAGAAATCCATTTATAGTAGAGTACAAAGATTCATGGGTAGAAAAGGGTTGCTATGTATGCATCATTATAGGTTATTGTGAAGGTGGAGATATGGCAGAAGCTATAAAGAAAGCTAACGGTGTCATGTTTTCTGAGGAGAAACTTTGTAAGTGGCTTGTTCAACTTCTTATGGCACTTGACTACTTGCACGTGAACCATATTCTTCATCGTGATGTCAAGTGTTCCAATATATTCTTGACAAAAGATCATGATATACGTCTTGGTGATTTTGGACTTGCCAAAATGTTGACTTCGGATGATCTTACTTCCTCTGTTGTGGGAACACCTAGCTACATGTGCCCTGAGCTCCTTGCTGACATACCCTATGGTTCTAAATCAGATATTTGGTCCTTGGGATGCTGTATATATGAAATGGCCTCGCTTAAGCCTGCGTTCAAAGCATTTGATATACAAGCACTGATTAACAAGATTAATAAGTCCATAGTGGCTCCACTGCCAACAAAATATTCTGGTGCATTTCGAGGTCTTGTTAAAAGCATGCTGCGGAAAAACCCAGAGCTTAGGCCTAGTGCTGCAGAGCTACTTGGGCATCCACATCTTCAACCTTATGTTCTTAAGATCCATCTCAAAATCAATAGCCCCAGTCGAAATACATTGCCAGGTCGTTGGCCAGAATCCGACTACATTAAGAAAACTAGACTTTTTAGCCTGGAAGATGATCCTGTTTCCATATATAGGGATAAGTGGAATACTTTTAGCAATGATCGGAACTTAAATCCTAGTATATCTGGAGCAGAGCAAGATTCTCATTGCTCTACTCTGGAAATAGATTGTACCCCTGATCATTTGAATGAAAGGTTAGCAGAACTGGAAGTTGAGGATAGCCGTGAAGTGAAGTCAATTCACAAGCCAGTTGTTTCTAGAACTTCTACCATTGGCAAGACTTCAAGACACACTTCACCAAAAGCTTCTTCTAACAAGAAGAAATCAACAGAACCTTCTAAGAATTATAAGCTTCCTGCTTCTCACCATAACACCAAACAACCTATCCATGGTCAGAGTCGCAGAGTATCCCTGCCGATGCCAAGAAGTGGTGCCAATCGGCAGCTGTCTCACAGGCCTAGCATTGGCTTACTCGACCATTTAAATTCACCCAATGTTTCGGTTAACGCCCCCCGTATTGATAAAATAGCAGAATTTCCATTAGCATCATATGAAGATCAATTGTTTCCCATTGCTAGACCTTCATCAACTTCTGCGCAGGGATCCTGGGGCACCCCGCCCTGCGTCAATGATTCAACAATGGTAGACAAATGTACAATCGAGCTAGGTGATAGAGCCTACACCAGGCCAAAATCTACGGATTCTTGGCAGGGAATTAAGCGCAGCATTTTAAAGGATGATGAGGTTAAAAGTGGCTCATCCGATCAAAATGCAACTGCTGGTGCATCAAGTAACAACTCTTCAGACCTGCGGCGTCGACAGTTTGACCCTTCTTCATTCCAACAAAGGGCTGAAGCGTTAGAAGGCTTGCTTGAGTTTAGCGCAAGACTACTACAGCAAGAAAGGTACGACGAACTTGGAGTTTTATTAAAACCGTTTGGGCCCGAGAAGGTTTCCCCAAGGGAAACTGCTATTTGGTTGAGCAAGAGCTTCAAAGACAATAGTGCCAACCGGGAACAATCGGTGTAA 1866 0.4271 MEQYEVLEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQTERSRRSAHQEMELISKLRNPFIVEYKDSWVEKGCYVCIIIGYCEGGDMAEAIKKANGVMFSEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDHDIRLGDFGLAKMLTSDDLTSSVVGTPSYMCPELLADIPYGSKSDIWSLGCCIYEMASLKPAFKAFDIQALINKINKSIVAPLPTKYSGAFRGLVKSMLRKNPELRPSAAELLGHPHLQPYVLKIHLKINSPSRNTLPGRWPESDYIKKTRLFSLEDDPVSIYRDKWNTFSNDRNLNPSISGAEQDSHCSTLEIDCTPDHLNERLAELEVEDSREVKSIHKPVVSRTSTIGKTSRHTSPKASSNKKKSTEPSKNYKLPASHHNTKQPIHGQSRRVSLPMPRSGANRQLSHRPSIGLLDHLNSPNVSVNAPRIDKIAEFPLASYEDQLFPIARPSSTSAQGSWGTPPCVNDSTMVDKCTIELGDRAYTRPKSTDSWQGIKRSILKDDEVKSGSSDQNATAGASSNNSSDLRRRQFDPSSFQQRAEALEGLLEFSARLLQQERYDELGVLLKPFGPEKVSPRETAIWLSKSFKDNSANREQSV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0691 621 Gene3D Transferase(Phosphotransferase) domain 1 84 271 - -
Amo16g0691 621 PANTHER SERINE/THREONINE-KINASE NEK4 1 606 - -
Amo16g0691 621 MobiDBLite consensus disorder prediction 526 557 - -
Amo16g0691 621 CDD STKc_Nek 3 258 - -
Amo16g0691 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Amo16g0691 621 MobiDBLite consensus disorder prediction 393 411 - -
Amo16g0691 621 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Amo16g0691 621 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0691 621 MobiDBLite consensus disorder prediction 348 429 - -
Amo16g0691 621 MobiDBLite consensus disorder prediction 532 557 - -
Amo16g0691 621 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 606 - -
Amo16g0691 621 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0691 621 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0691 621 MobiDBLite consensus disorder prediction 362 378 - -
Amo16g0691 621 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Amo16g0691 621 SUPERFAMILY Protein kinase-like (PK-like) 1 307 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0691 Amo-Chr16 11198651 11203875 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0691 10 289 MAP Kinase Kinase Kinase AT1G53570 30.333 4.98e-38 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Amo16g0691 Pkinase 1.3e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0691 K08857 - gmx:100796019 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0691 16 11198651 11203875 Amo16g0691 16 11198651 11203875 ECH