Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0678 ATGATGGCATCGGAGCAACACGACACCGTTTTCCCAGAAGAAGACATGGACGAAGACGACGAGGAGTCCCAAGAGGACGAAGAAGAGGAAGACATCGATGACGACGACGTTTTGCCTGACGACGAAGAAAACGAGCCCTCTCCCTCTACCTCGTCCGCTGCCCTCGCCGTCACCGTCGCCGTTCCCTCCTCCGTCATCCCCAACGGCGAAAAGGCTCCAATTTCAACCCCCACTGCCAACGCGGCCACCACCGTGGTCGTTGCCCTCGAAGGCAGCTCCTCCGATCCGAAACGGCAGCAGCAAATCGAGGAGAAGAAGCCGCTCGACGATTCACGGAGGCTGTTCCAGCGGCTGTGGACGGACGAGGATGAGATCGAGCTTCTGCAAGGGTTTCTCGAGTACACATCGCAGCGAGGTTCATCTCACCACAACGACACTGCTTTGTTCTACGACCAAATTAAGTCGAAGCTTCAGCTGGATTTCAACAAGAACCAGCTTGTGGAGAAGATCCGGAGGTTGAAGAAGAAGTACCGCAACGTTCTCAACAAGATTGGTTCCGGTAAGGAATTCAACTTTAAGAGCGCTCACGATCAAGCCACCTTCGAGATTTCACGCAAGATCTGGAGCAACTTGGGTCCAGTCGCTGATAATGCCTTGGACGACGACGAAATCAACCTCAATCCCATTCCTAACCCTAACCCTAACCTCAATTTTACCTTCGCCCTCCCCGCGCCCAGGACTGAGACTCTATTCGGGAATTCCTCCGAGAAGAAAACGCCGCCTTCGCGGAAGCGATCACGGCCGCGATCATCCGCTGCGACAACGGTGAAAATCGAAGAGAGACGCGAGTCAATGGATGGATCGGCGTCACATAAAGAGCATAACTTTAATCTCAACGCTGCCGCTACAGGTCTCCCTGCAACGCCAAACAATAACTGTGAGAGTAACAAGTGTAGCGGTGGATATGGCATACCGGGTTTGGTTGAAGAGACGGTGAGGAGTTGTTTGTCGCCGTTGGTGAAGGAATTGGTGGGTGGTGCTGCCATGGGAGGTGGTCACTTTGGCGGAAGAGGGTTTGGAGGTGGAGGCTTTTCACTGAACCCCATTCCATTGGGGTTCGGAGCGATGAATAATTTGGGTTTGGGTTTGGGTGGTGGGGAACTAGTGGATGAGAGATGGAGGAAGCAGCAAATATTGGAATTGGAAGTGTACTCCAAGAGGCTGGAACTGGTTCAGGAACAGATCAAAGCTGCTCTTGAGGAATTGCGTTCAACGGCAGGAAGCTGA 1287 0.5322 MMASEQHDTVFPEEDMDEDDEESQEDEEEEDIDDDDVLPDDEENEPSPSTSSAALAVTVAVPSSVIPNGEKAPISTPTANAATTVVVALEGSSSDPKRQQQIEEKKPLDDSRRLFQRLWTDEDEIELLQGFLEYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKIGSGKEFNFKSAHDQATFEISRKIWSNLGPVADNALDDDEINLNPIPNPNPNLNFTFALPAPRTETLFGNSSEKKTPPSRKRSRPRSSAATTVKIEERRESMDGSASHKEHNFNLNAAATGLPATPNNNCESNKCSGGYGIPGLVEETVRSCLSPLVKELVGGAAMGGGHFGGRGFGGGGFSLNPIPLGFGAMNNLGLGLGGGELVDERWRKQQILELEVYSKRLELVQEQIKAALEELRSTAGS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0678 428 MobiDBLite consensus disorder prediction 1 56 - -
Amo16g0678 428 MobiDBLite consensus disorder prediction 249 291 - -
Amo16g0678 428 PANTHER BNAANNG10740D PROTEIN 2 425 - -
Amo16g0678 428 MobiDBLite consensus disorder prediction 11 43 - -
Amo16g0678 428 Coils Coil 163 183 - -
Amo16g0678 428 PANTHER BNAANNG10740D PROTEIN-RELATED 2 425 IPR007592 GO:0006355
Amo16g0678 428 Pfam Protein of unknown function, DUF573 115 209 IPR007592 GO:0006355
Amo16g0678 428 Coils Coil 401 428 - -
Amo16g0678 428 MobiDBLite consensus disorder prediction 274 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0678 Amo-Chr16 11060706 11063508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0678 2 424 GeBP Transcription Factor Family AT5G28040 43.290 1.89e-90 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Amo16g0678 DUF573 3.4e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0678 - - gmx:100779712 394.045