Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0669 ATGGTTTCATCATCATCTCCCTCTGTAGTGTTTACAGTGAAATGGTGCGAACCAGAGCTAGTGTCTCCGGCCTCGCCCACTCCCCATGAAGTTAAACAACTATCAGACATAGATGATCAAGAAGGGCTACGTTACCAACTTCCAATCATAAATATATATCGTCACAATCCATCAATAGAAGGAAAAGACCCAGTAAAGGTGATAAGAGATGCACTCTCAAGAACACTTGTGTTTTACTACCCGTTTGCCGGTAGGCTTAGGGAGGGTCATGGCGGCAAGTTGATGGTTGATTGCACTGCAGAGGGTGTATTGTTCATTGAGGCCGATGCTGACGTGCCACTTCATCAACTTGGTGAAGCTCTTCAACCTCCATTCCCTTGCTATAAGGAATTGCTTTACAATGTTCCTGGCTCAGATGGAATTGTCGGCTGTCCCCTTTTACTCTTACAGGTCACACGCTTTAAGTGCGGCGGTTTTTCTGTCGGCATACGGGTGAACCACACGATGGTAGATGCAACTGGTATTGTGCAATTCATGAACGCCATGGCTGAAATCTCTCGAGGCTCTCATCAACCTTCCATTCTACCCGTTTGGTGTAGGGAGCTTCTAACTGCAAGAGACCCGCCACGCATCACATGCAACCATCGAGAATTTGAGGAAGCAAAAGATATTAAGGAATGGGAAACCATTATTGATGACAAAAACATGATTAAACGAAATTTCTTCTTTGGACCCACTGAAATAGCTTCTCTTCGCTGCTTGACTCTAAATCAATCCGCTGAATACACTGGATTTGAGCTTATCACTGCATGCCTCTGGTATTGTCTTGTAAAAGCATTGCAACTACCACCAGAAAAAGAAGTTCGAATGTATTGTGTCGTCAATGCTCGTGCTAGATTTAACCCTCCCATGCCAATCGGTTATTATGGAAACGTTATATCGTTTCCGGCGGCGGTCTCCACCGTAGAGAAGCTATGTGAAAATCCATTTGAATATATTGTAAAGTTAATAAAAAAAGCGAAAGCCGAGCCAACAGAAGAATACATGCATTCTTTAGCAGATTTAATGGTGATTAAGGGACGACCTTTGACTACAAGAGCATGGTCTTTTCTTGTGTCAAAGGTGACACGTATTGGGTTTAGAAAAGTGGATTTTGGGTGGGGCAATGCAGTGTATGGTGGGATAAGTGGCGACAAGATTTTTGGAGAACTTACTCTCATGGATTGTGAGAATGCAAATGGAGAAGAAAGTGTTGTAGTTCCACTTTACTTGCCTGCCAATGCTATGAAGAGGTTTGCAAAAGAAATGGATGATTTGCTTCGGATCCCAAATCAACCTACAATGAGTGGCCAAAACAAAGCCTGTAATTAA 1371 0.4318 MVSSSSPSVVFTVKWCEPELVSPASPTPHEVKQLSDIDDQEGLRYQLPIINIYRHNPSIEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGGKLMVDCTAEGVLFIEADADVPLHQLGEALQPPFPCYKELLYNVPGSDGIVGCPLLLLQVTRFKCGGFSVGIRVNHTMVDATGIVQFMNAMAEISRGSHQPSILPVWCRELLTARDPPRITCNHREFEEAKDIKEWETIIDDKNMIKRNFFFGPTEIASLRCLTLNQSAEYTGFELITACLWYCLVKALQLPPEKEVRMYCVVNARARFNPPMPIGYYGNVISFPAAVSTVEKLCENPFEYIVKLIKKAKAEPTEEYMHSLADLMVIKGRPLTTRAWSFLVSKVTRIGFRKVDFGWGNAVYGGISGDKIFGELTLMDCENANGEESVVVPLYLPANAMKRFAKEMDDLLRIPNQPTMSGQNKACN* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0669 456 Gene3D - 218 436 IPR023213 -
Amo16g0669 456 Gene3D - 12 217 IPR023213 -
Amo16g0669 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 442 - -
Amo16g0669 456 Pfam Transferase family 13 438 - -
Amo16g0669 456 PANTHER ALCOHOL ACYLTRANSFERASE 13 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0669 Amo-Chr16 10888431 10890408 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0669 20 434 Monolignol Biosynthesis Gene Families AT5G48930 28.806 3.66e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0669 K19861 - gmx:100792864 558.91