Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0668 ATGAAGAATATTTTCAAGAAGCTTCACAAAGGGACCAGCCACGACGCTAACCGACTCAATGAAACTTCTGCTTCAAACGCCTCATCCTCATTAGCCGTCGATCACCCCTTAGTTCAGAATTCTGGCGCTTCGCCGGCCACTCCTTCACCCGCTTCTCTTTCGTCATCGCCGTCTCTGGCCGCCGCGACGACGCCTTCTTCCGTTTCCACTCCGGAAGCTTCAGCGGCCAACCGGCAGGACTATTTTTCGTCGGAGGAAGAATTTCAGGTCCAGCTTGCGCTCGCCATAAGTGCTTCGTCCAATTCGGACTTCCGCGGTGATCACGAGAAGGATCAGATCCATGCGGCGACGCTGTTGAGCTTAGGAGGACGTGGAATCGATTCAACAAGGATTGATAACGGTGTGGCGGAGGCGCTGTCCAGGCATTATTGGGAATACAGCGTGCTTGACTATGAACAGAAAGTGGTTGATGGTTTTTATGATGTATATGGGCTTTATACTGATTTAACAATGCAAGGAAAGATGCCATCTCTGAGAGATCTTGAAGCAGAACCTGAAAGCTCTGGCTTCGAAGTTGTCATAGTTGATCGTACAATTGATCCTGCTATTGTAGAGCTGTTGCAAATTGCACATTGTATTGCATTGGACTGCCCTGTCACTGGGCTTGGTATTTTGGTACAAAGGATTGCTGAACTTGTTACAAGCCATATGGGTGGTCCTGTAAAGGATGCTAGTACTATATTGGCAAGATGGACAGAAAGAAGTACTGAGTTAAGAACATCTCTACACACAATCATGTTGCCTCTTGGGTGCATAAATATTGGGCTCTCCAGACATCGTGCTTTGCTTTTCAAGGTAATAGCTGACAATATCAATATGCCTTGTAGACTGGTTAAAGGCAGTCATTATACTGGTGTTGAGGATGATGCTGTCAACATTATAAAGTTGGAGGATGAAAGGGAGTTTTTGGTTGATCTCATGGCTGCTCCTGGCACACTTATCCCAATTGATATTTCAAATTCAAAGGATCCTTCCTTTAAACCTTACAATCCTAAGGTCTTACCAAGTTTTCCTTCCACTAAGGAAACTGATTATCCTAACACGAGACCAATGTTATCTCATGGTGAAGGTAGCAGTAAAAATTTTGCTATGAGAAGTGCTTTGCCTCCACTGAATGAAAAACCATGTTTTGACGAGTCAGCTTCAAGCTTTCGTTTGAATGGAGACACTGATGTTGGAACTTACAAAATGCCTAATTGTTTGATGCCTAACCAACCAGAAAATATTGCACCACTATCTGGAGTTTCTCTATACAAGGGGACCCATGGAAATGTGGCTGGTGATAGGACTAGATTAAATGTCAACATTGTGCCCTATGGCCAGAATAGCCCTGATGACTCTCAAAGCCTTTTTGCAGATCTTAACCCTTTCCAGATAAAAGGAATTGGCAAGACATTTGTGCTTAACAAATCAGGAGCAAATAAAGCTCATGATCTTCAGAGTACAAGAAACAATACCGTCACTGGTCGACCACCGATCCCACCAAAATGGACAAATCGTTATGCTTACAATGAAGTCCCTAGGAACCTTAGTTGTGATCCTAATGAATATAGCCAACCTTTATTAGCTTCTAGTAGTTCTTCTAAGATTGAACTGAATGATTCCAAACCACCATATAGTTCAAACTTAAATAATAATAGAAATACCCAAAAATTGGCTCAAGGAACTTGTGCAGTTTCTCCATCTTATGCAGGTGAACTTAACATGGCTGAAGATCTAAACACTGATTGTAAAAAAGGGGATATGGAATATTCTCCAAATGACAAAGTTGATGTGGTTAAAGAACATGAAAACATTTATAGTGGTCAACTTGACCCAAGGAAATCCACACATGACAGGTTCATGGGGAAAAATATGAAATTAAGGGATTTAGAGAGTCAGAACCTGTCAGTTGACTCCATTACAAAAAGGGTTGATCAAATGTTGGATGATGTAGATGTCAGTGAATGTGAGATTCCATGGGAGGATCTTGTTATTGGAGAAAGAATTGGTCTAGGTTCATATGGTGAGGTATACCATGCTGACTGGAATGGCACGGAGGTTGCTGTGAAGAAATTTTTGGAGCAGGATTTTTCAGGTGATGCCTTGAATGAATTCAAAAGAGAAGTACGGATAATGCGTAGACTGCGTCATCCAAATGTTGTTCTTTTCATTGGTGCTGTTACACGTCCTCCCAATCTTTCAATCATTACAGAGTTTCTTCCCAGAGGAAGCTTGTATCGAATACTTCATAATCCTAACTGTCAGATTGACGAGAAACAAAGGATTAAGATGGCTCTGGATGTGGCCAGAGGCATGAATTGCTTACATACCAGCACACCTACAATTGTTCACAGAGATCTCAAGTCTCCGAATCTTTTGGTGGATAAGAACTGGAATGTTAAGGTCTGTGATTTTGGGTTGTCACGCTTGAAACATAATACGTTCTTGTCATCCAAGTCAACAGGTGGAACGCCCGAATGGATGGCTCCTGAAGTTCTCCGCAACGAGCCCTCGAATGAGAAGTGTGACGTCTATAGTTTTGGGGTCATCCTATGGGAGCTTGCCACTCTAAGGCTGCCCTGGAGTGAAATGAATCCTATGCAAGTTGTTGGCGCTGTGGGTTTCCAAAACCGCCGTCTTGATATCCCTAAGGAAGTTGACCCTATAGTTGCAAGAATAATATGGGAATGCTGGCAACAGGATCCAAATTTGCGTCCATCATTTGCACAGCTCACAACGGCTTTAAAGCCCCTTCAGCGTCTAGTTATCCCATCCCAGCAAGACTAG 2829 0.4298 MKNIFKKLHKGTSHDANRLNETSASNASSSLAVDHPLVQNSGASPATPSPASLSSSPSLAAATTPSSVSTPEASAANRQDYFSSEEEFQVQLALAISASSNSDFRGDHEKDQIHAATLLSLGGRGIDSTRIDNGVAEALSRHYWEYSVLDYEQKVVDGFYDVYGLYTDLTMQGKMPSLRDLEAEPESSGFEVVIVDRTIDPAIVELLQIAHCIALDCPVTGLGILVQRIAELVTSHMGGPVKDASTILARWTERSTELRTSLHTIMLPLGCINIGLSRHRALLFKVIADNINMPCRLVKGSHYTGVEDDAVNIIKLEDEREFLVDLMAAPGTLIPIDISNSKDPSFKPYNPKVLPSFPSTKETDYPNTRPMLSHGEGSSKNFAMRSALPPLNEKPCFDESASSFRLNGDTDVGTYKMPNCLMPNQPENIAPLSGVSLYKGTHGNVAGDRTRLNVNIVPYGQNSPDDSQSLFADLNPFQIKGIGKTFVLNKSGANKAHDLQSTRNNTVTGRPPIPPKWTNRYAYNEVPRNLSCDPNEYSQPLLASSSSSKIELNDSKPPYSSNLNNNRNTQKLAQGTCAVSPSYAGELNMAEDLNTDCKKGDMEYSPNDKVDVVKEHENIYSGQLDPRKSTHDRFMGKNMKLRDLESQNLSVDSITKRVDQMLDDVDVSECEIPWEDLVIGERIGLGSYGEVYHADWNGTEVAVKKFLEQDFSGDALNEFKREVRIMRRLRHPNVVLFIGAVTRPPNLSIITEFLPRGSLYRILHNPNCQIDEKQRIKMALDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSEMNPMQVVGAVGFQNRRLDIPKEVDPIVARIIWECWQQDPNLRPSFAQLTTALKPLQRLVIPSQQD* 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0668 942 MobiDBLite consensus disorder prediction 537 567 - -
Amo16g0668 942 ProSiteProfiles Protein kinase domain profile. 677 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0668 942 Pfam Protein tyrosine and serine/threonine kinase 678 928 IPR001245 GO:0004672|GO:0006468
Amo16g0668 942 MobiDBLite consensus disorder prediction 17 81 - -
Amo16g0668 942 Gene3D Transferase(Phosphotransferase) domain 1 756 937 - -
Amo16g0668 942 PANTHER SERINE-THREONINE PROTEIN KINASE 72 942 - -
Amo16g0668 942 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Amo16g0668 942 PRINTS Tyrosine kinase catalytic domain signature 837 847 IPR001245 GO:0004672|GO:0006468
Amo16g0668 942 PRINTS Tyrosine kinase catalytic domain signature 900 922 IPR001245 GO:0004672|GO:0006468
Amo16g0668 942 PRINTS Tyrosine kinase catalytic domain signature 751 764 IPR001245 GO:0004672|GO:0006468
Amo16g0668 942 PRINTS Tyrosine kinase catalytic domain signature 856 878 IPR001245 GO:0004672|GO:0006468
Amo16g0668 942 PRINTS Tyrosine kinase catalytic domain signature 790 808 IPR001245 GO:0004672|GO:0006468
Amo16g0668 942 Pfam Ethylene-responsive protein kinase Le-CTR1 136 334 - -
Amo16g0668 942 MobiDBLite consensus disorder prediction 1 81 - -
Amo16g0668 942 SMART serkin_6 677 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g0668 942 Gene3D Phosphorylase Kinase; domain 1 670 754 - -
Amo16g0668 942 SUPERFAMILY Protein kinase-like (PK-like) 660 926 IPR011009 -
Amo16g0668 942 CDD STKc_MAP3K-like 683 929 - -
Amo16g0668 942 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Amo16g0668 942 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 72 942 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0668 Amo-Chr16 10878782 10886855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0668 1 913 MAP Kinase Kinase Kinase AT1G08720 55.413 0.0 920
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo16g0668 PK_Tyr_Ser-Thr 1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0668 - - aprc:113870732 1292.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0668 16 10878782 10886855 Amo16g0668 16 10878782 10886855 ECH