Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0663 ATGGCTATTGATCATATAAGTTCTCTGTTTGCGAAATTGCAAGCATTATCGACTTCAGATCATGGCTCCGTTGTGTCCATGAACATATTTGTGGCACTTCTGTGTGCTTGTATTGTCATTGGACATCTTCTTGAGGAAAATCGCTGGATGAATGAGTCCATCACTGCCCTTGTCATAGGAATATGCACCGGCATACTCATTTTGATGCTTAGCGGTGGTAGAAGCTCTCATATTCTTGTGAAAAAGAAGCAGTTTTTTGTTAACTTTATCACCATCATGATGTTTGGTGCTATTGGTACATTGATAAGTTGTGCCATCATAACTTACGGTGTCGCAAAAACTTTTAAGAGGATCGGAATTCGTTCACTGGAGATTGCGGATTATCTAGCAATTGGTGCAATATTTTCTGCTACCGATTCTGTGTGCACCTTACAGGTGCTAAATCAGGATGAGACACCTTTATTGTACAGTCTTGTATTTGGAGAGGGTGTTGTAAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCCAAAGTTTTGACATCAACCAAATTAATCCATCAATAGGGTTGCATTTCTTTGGCAACTTCTTGTACCTATTTACCACAAGCACTCTTCTTGGGGTTTTTACTGGTCTACTCAGTGCTTACATTATTAAGAAGCTTTACATTGGCAGGCACTCAACAAATCGTGAGTTTGCTCTGATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAATTATGCTATCTGAGTGGAATTCTCACTGTGTTCTTTTGTGGGATTACAATGTCTCACTATACTTGGCATAATGTGTCTGAAAGCTCAAGAATCACTACCAAACATGCTTTTGCTACTTTGTCATTTGTTGCCGAGACTTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAGGTTTGCCAGCGACAGGCCTGCAACTTCCCTTGCTGTGAGCTCAGTATTGTTGGGTCTAGTACTTGCTGGAAGAGCAGCATTTGTTTTCCTCTTATCATTCATATCCAACATCACTAGGAAGTCATCAAAAGAGGGCATAAGCTTCAGGCAGCAGGTGATTATTTGGTGGGCTGGTCTTATGAGAGGAGCTGTTTCAATGGCACTTGCTTATAATCAGTTCACCTTGTTAGGGCATACTGCAAAGCGAGCGAATGCCATTATGATCACCAGCACCATCACTGTTGTGTTAGTCAGTACAGTGGTGTTCGGTTTGATGACAAAGCCATTAATAAGGTTTTTGCTGCCTGTGCCCAGCGGCCTTACGCCGAAACGGAAAAACAGCACCGCGAACATAGTAGATTCAGCTTCTCCAAAAGCTAACACAGTACCATTTCTCTCGAATGGCGCAGACTCTGAAGCAAATCTTGAACCCCAAGAAAGTTCTTATGGTCGAACTCCAAGAAGCATTCGTGACTTACTATCCACTCCCACACACTCTGTTCATCGCTTATGGCGCAAATTCGATAACTCGTTTATGCGTCCAGTTTTTGGTGGCAGGGGCTTTGTTCCAATCGAACGCGGTACACCAACCGAACGCAACACCCAAAATCAGTGGCATTGA 1593 0.4237 MAIDHISSLFAKLQALSTSDHGSVVSMNIFVALLCACIVIGHLLEENRWMNESITALVIGICTGILILMLSGGRSSHILVKKKQFFVNFITIMMFGAIGTLISCAIITYGVAKTFKRIGIRSLEIADYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDINQINPSIGLHFFGNFLYLFTTSTLLGVFTGLLSAYIIKKLYIGRHSTNREFALMMLMAYLSYMMAELCYLSGILTVFFCGITMSHYTWHNVSESSRITTKHAFATLSFVAETFIFLYVGMDALDIDKWRFASDRPATSLAVSSVLLGLVLAGRAAFVFLLSFISNITRKSSKEGISFRQQVIIWWAGLMRGAVSMALAYNQFTLLGHTAKRANAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVPSGLTPKRKNSTANIVDSASPKANTVPFLSNGADSEANLEPQESSYGRTPRSIRDLLSTPTHSVHRLWRKFDNSFMRPVFGGRGFVPIERGTPTERNTQNQWH* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0663 530 Pfam Sodium/hydrogen exchanger family 80 421 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo16g0663 530 PANTHER SODIUM/HYDROGEN EXCHANGER 80 529 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo16g0663 530 MobiDBLite consensus disorder prediction 457 481 - -
Amo16g0663 530 PANTHER SODIUM/HYDROGEN EXCHANGER 2 80 529 - -
Amo16g0663 530 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 80 - -
Amo16g0663 530 Gene3D - 124 176 - -
Amo16g0663 530 PANTHER SODIUM/HYDROGEN EXCHANGER 8 80 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0663 Amo-Chr16 10782397 10787091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0663 7 527 Antiporters AT3G05030 65.193 0.0 715
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0663 - - aip:107645855 987.638