Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0662 ATGGGACCATGTACCATAGAAGATGGCTGTAAACTTAACCATGCTATTGTTTGTAATGAGGTGACTTTGAAGTCAGGAGCTGTTCTGGAACCTGGTGTTATTTTGTCATTCAAGGTTGTAGTTGGGCCAGAGTTTGTTGTCCCTCCTTATTCATATGTATCACTATTACAACAGCCTGTTGAGGAAGACAGTGATGAGGAGCTTGAATATGCTGACAGTACTAGCGTCATCACAAGCAAAGTGGATAAGTCGGATGAAGAGGATGCATCTGAAGTACCAGAGGCACGTATTAGCTCTGTTTCAGAGCTAGGTATGGGTGGGGTTGGTTACATTTGGCAAAAATGTGAAGGAAGCCAGGAAGAAGAGTGGAGGCATTCAGTGGCACCTATTCCTGCAGATAAAATTTCTGAGGCAATGAAAACCATGGAAGATGATCTGGAGTTAACTCATGATGGCAGTATTCTCCCACCTTCTGGAGAGCTGATACCTGATTCTAATGACTCAGATGAAGATAATGAAGACTCCAGGGATGATTTCTTTGAGAGAGAGGTTGAAGCGACATTCCTCAGGGCTGTGAATGAAAACATACAAGAAGACCACTTGATCTTAGAAGTTAACTCTTTGAAGTTGTCATGCAATAAGCTGACTGCTGATTGTGCGGGAGCTGTGTTTTATGCTATGATGAAGTATGCGGTAGACACTCCCCATAGTTCACTTGATGGCTTGATGCAGAATGTTAACGATGTTCTATCAAAATGGAAAAAGGCTCTTACATCCTATCTGACAGACATAGATGAGCAGATTGAGATCATACTGAAATTTGAAGAAATTTGTTTAGAATCTGCTAGGGAGTTTGCTCCATTATTCACTAAGATTTTGCTCCACTTGTATAAGGAGGATATTATTGAAGAAGATGCTATTTTAAGTTGGGAAGATGAGAAGAGAGATGCAGATGAGGCAGATAAAGTATTTGTTAACAAGGCTCAAGAATTTATCCAATGGCTAAAAGTGGCTGAAGAAGAAGATGAATAG 1032 0.407 MGPCTIEDGCKLNHAIVCNEVTLKSGAVLEPGVILSFKVVVGPEFVVPPYSYVSLLQQPVEEDSDEELEYADSTSVITSKVDKSDEEDASEVPEARISSVSELGMGGVGYIWQKCEGSQEEEWRHSVAPIPADKISEAMKTMEDDLELTHDGSILPPSGELIPDSNDSDEDNEDSRDDFFEREVEATFLRAVNENIQEDHLILEVNSLKLSCNKLTADCAGAVFYAMMKYAVDTPHSSLDGLMQNVNDVLSKWKKALTSYLTDIDEQIEIILKFEEICLESAREFAPLFTKILLHLYKEDIIEEDAILSWEDEKRDADEADKVFVNKAQEFIQWLKVAEEEDE* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0662 343 CDD W2_eIF2B_epsilon 177 343 IPR044123 GO:0005085|GO:0031369
Amo16g0662 343 MobiDBLite consensus disorder prediction 64 95 - -
Amo16g0662 343 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 4 342 - -
Amo16g0662 343 MobiDBLite consensus disorder prediction 79 93 - -
Amo16g0662 343 MobiDBLite consensus disorder prediction 149 177 - -
Amo16g0662 343 SUPERFAMILY ARM repeat 180 339 IPR016024 -
Amo16g0662 343 Pfam eIF4-gamma/eIF5/eIF2-epsilon 266 343 IPR003307 GO:0005515
Amo16g0662 343 Gene3D - 167 343 - -
Amo16g0662 343 SUPERFAMILY Trimeric LpxA-like enzymes 2 53 IPR011004 -
Amo16g0662 343 ProSiteProfiles W2 domain profile. 174 343 IPR003307 GO:0005515
Amo16g0662 343 SMART 542_3 254 341 IPR003307 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0662 Amo-Chr16 10774997 10779732 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0662 5 338 Eukaryotic Initiation Factors Gene Family AT2G34970 53.869 1.49e-115 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0662 K03240 - gmx:100784894 492.656