Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0658 ATGGCTATTGATCATATAAGTTCTCTGTTTGCGAAACTGCAAGCATTATCGACTTCAGATCATGGCTCCGTTGTGTCCATGAACATATTTGTGGCACTTCTGTGTGCTTGTATTGTCATTGGACATCTTCTTGAGGAAAATCGCTGGATGAATGAGTCCATCACTGCCCTTGTCATAGGAATATGCACCGGCATACTCATTTTGATGCTTAGCGGTGGTAGAAGCTCTCATATTCTTGTTTTCAGTGTCGCAAAAACTTTTAAGAAGATTGGAATTCGTTCACTGGAGATTGCGGATTATCTAGCAATTGGTGCAATATTTTCTGCTACGGATTCTGTGTGCACCTTACAGGTTTGGAACTGTAATATATATATATCTGTGCTAAATCAGGATGAGACACCTTTATTGTACAGTCTTGTATTTGGAGAGGGTGTTGTAAATGATGCTACATCAGTGGTGCTTTTCAATGCGATCCAAAGTTTTGACATCAACCAAATTAATCCATCAATAGGGTTGCATTTCTTTGGCAACTTCTTGTATCTATTTACCACAAGCACTCTTCTTGGGACTGGTCTACTCAGTGCTTACATTATTAAGAAGCTTTACATTGGCAGGCACTCAACAAATCGTGAGTTTGCTCTGATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAATTATGCTATCTGAGTGGAATTCTCACTGTGTTCTTTTGTGGGATTACAATGTCTCACTATACTTGGCATAATGTGTCTGAAAGCTCAAGAATCACTACCAAACATGCGTTTGCTACTTTGTCATTTGTTGCCGAGACTTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAGGTTTGCTAGCGACAGGCCTGCAACTTCTCTTGCTGTGAGCTCAGTATTGTTGGGTCTAGTACTTGCTGGAAGAGCAGCATTTGTTTTCCTCTTATCATTCATATCCAACATCACTAGGAAGTCATCAAAAGAGGGCATAAGCTTCAGGCAGCAGGTGATTATTTGGTGGGCTGGTCTTATGAGAGGAGCTGTTTCAATGGCACTTGCTTATAATCAGTTCACCTTGTTAGGGCATACTGCAAAGCGAGCGAATGCCATTATGATCACCAGCACCATCACTGTTGTGTTAGTCAGTACAGTGGTGTTCGGTTTGATGACAAAGCCATTAATAAGGTTTTTGCTGCCTGTGCCCAGCGGCCTTACGCCGAAACGGAAAAACAGCACCGCGAACATAGTAGATTCAGCTTCTCCAAAAGCCATCACAGTACCATTTCTCTCGAATGGCGCAGACTCTGAAGCAAATCTTGAACCCCAAGAAAGTTCTTATGGTCGAACTCCAAGAAGCATTCGTGACTTACTATCCACTCCCACACACTCTGTTCATCGCTTATGGCGCAAATTCGATAACTCATTTATGCGTCCAGTTTTTGGTGGCAGGGGCTTTGTTCCAGTAGAACGCGGTACACCAACCGAACGCAACACCCAAAATCAGTGGCATTGA 1530 0.4242 MAIDHISSLFAKLQALSTSDHGSVVSMNIFVALLCACIVIGHLLEENRWMNESITALVIGICTGILILMLSGGRSSHILVFSVAKTFKKIGIRSLEIADYLAIGAIFSATDSVCTLQVWNCNIYISVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDINQINPSIGLHFFGNFLYLFTTSTLLGTGLLSAYIIKKLYIGRHSTNREFALMMLMAYLSYMMAELCYLSGILTVFFCGITMSHYTWHNVSESSRITTKHAFATLSFVAETFIFLYVGMDALDIDKWRFASDRPATSLAVSSVLLGLVLAGRAAFVFLLSFISNITRKSSKEGISFRQQVIIWWAGLMRGAVSMALAYNQFTLLGHTAKRANAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVPSGLTPKRKNSTANIVDSASPKAITVPFLSNGADSEANLEPQESSYGRTPRSIRDLLSTPTHSVHRLWRKFDNSFMRPVFGGRGFVPVERGTPTERNTQNQWH* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0658 509 PANTHER SODIUM/HYDROGEN EXCHANGER 2 8 83 - -
Amo16g0658 509 Gene3D - 96 157 - -
Amo16g0658 509 PANTHER SODIUM/HYDROGEN EXCHANGER 86 508 IPR018422 GO:0006812|GO:0015299|GO:0016021
Amo16g0658 509 MobiDBLite consensus disorder prediction 439 458 - -
Amo16g0658 509 PANTHER SODIUM/HYDROGEN EXCHANGER 2 86 508 - -
Amo16g0658 509 Pfam Sodium/hydrogen exchanger family 58 400 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo16g0658 509 PANTHER SODIUM/HYDROGEN EXCHANGER 8 83 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0658 Amo-Chr16 10717672 10722667 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0658 7 506 Antiporters AT3G05030 60.688 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0658 - - aip:107645855 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0658 16 10717672 10722667 Amo16g0658 16 10717672 10722667 ECH