LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo16g0658	ATGGCTATTGATCATATAAGTTCTCTGTTTGCGAAACTGCAAGCATTATCGACTTCAGATCATGGCTCCGTTGTGTCCATGAACATATTTGTGGCACTTCTGTGTGCTTGTATTGTCATTGGACATCTTCTTGAGGAAAATCGCTGGATGAATGAGTCCATCACTGCCCTTGTCATAGGAATATGCACCGGCATACTCATTTTGATGCTTAGCGGTGGTAGAAGCTCTCATATTCTTGTTTTCAGTGTCGCAAAAACTTTTAAGAAGATTGGAATTCGTTCACTGGAGATTGCGGATTATCTAGCAATTGGTGCAATATTTTCTGCTACGGATTCTGTGTGCACCTTACAGGTTTGGAACTGTAATATATATATATCTGTGCTAAATCAGGATGAGACACCTTTATTGTACAGTCTTGTATTTGGAGAGGGTGTTGTAAATGATGCTACATCAGTGGTGCTTTTCAATGCGATCCAAAGTTTTGACATCAACCAAATTAATCCATCAATAGGGTTGCATTTCTTTGGCAACTTCTTGTATCTATTTACCACAAGCACTCTTCTTGGGACTGGTCTACTCAGTGCTTACATTATTAAGAAGCTTTACATTGGCAGGCACTCAACAAATCGTGAGTTTGCTCTGATGATGCTAATGGCATACCTTTCCTACATGATGGCTGAATTATGCTATCTGAGTGGAATTCTCACTGTGTTCTTTTGTGGGATTACAATGTCTCACTATACTTGGCATAATGTGTCTGAAAGCTCAAGAATCACTACCAAACATGCGTTTGCTACTTTGTCATTTGTTGCCGAGACTTTTATCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGATAAATGGAGGTTTGCTAGCGACAGGCCTGCAACTTCTCTTGCTGTGAGCTCAGTATTGTTGGGTCTAGTACTTGCTGGAAGAGCAGCATTTGTTTTCCTCTTATCATTCATATCCAACATCACTAGGAAGTCATCAAAAGAGGGCATAAGCTTCAGGCAGCAGGTGATTATTTGGTGGGCTGGTCTTATGAGAGGAGCTGTTTCAATGGCACTTGCTTATAATCAGTTCACCTTGTTAGGGCATACTGCAAAGCGAGCGAATGCCATTATGATCACCAGCACCATCACTGTTGTGTTAGTCAGTACAGTGGTGTTCGGTTTGATGACAAAGCCATTAATAAGGTTTTTGCTGCCTGTGCCCAGCGGCCTTACGCCGAAACGGAAAAACAGCACCGCGAACATAGTAGATTCAGCTTCTCCAAAAGCCATCACAGTACCATTTCTCTCGAATGGCGCAGACTCTGAAGCAAATCTTGAACCCCAAGAAAGTTCTTATGGTCGAACTCCAAGAAGCATTCGTGACTTACTATCCACTCCCACACACTCTGTTCATCGCTTATGGCGCAAATTCGATAACTCATTTATGCGTCCAGTTTTTGGTGGCAGGGGCTTTGTTCCAGTAGAACGCGGTACACCAACCGAACGCAACACCCAAAATCAGTGGCATTGA	1530	0.4242	MAIDHISSLFAKLQALSTSDHGSVVSMNIFVALLCACIVIGHLLEENRWMNESITALVIGICTGILILMLSGGRSSHILVFSVAKTFKKIGIRSLEIADYLAIGAIFSATDSVCTLQVWNCNIYISVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDINQINPSIGLHFFGNFLYLFTTSTLLGTGLLSAYIIKKLYIGRHSTNREFALMMLMAYLSYMMAELCYLSGILTVFFCGITMSHYTWHNVSESSRITTKHAFATLSFVAETFIFLYVGMDALDIDKWRFASDRPATSLAVSSVLLGLVLAGRAAFVFLLSFISNITRKSSKEGISFRQQVIIWWAGLMRGAVSMALAYNQFTLLGHTAKRANAIMITSTITVVLVSTVVFGLMTKPLIRFLLPVPSGLTPKRKNSTANIVDSASPKAITVPFLSNGADSEANLEPQESSYGRTPRSIRDLLSTPTHSVHRLWRKFDNSFMRPVFGGRGFVPVERGTPTERNTQNQWH*	510

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Amo16g0658	509	PANTHER	SODIUM/HYDROGEN EXCHANGER 2	8	83	-	-
Amo16g0658	509	Gene3D	-	96	157	-	-
Amo16g0658	509	PANTHER	SODIUM/HYDROGEN EXCHANGER	86	508	IPR018422	GO:0006812\|GO:0015299\|GO:0016021
Amo16g0658	509	MobiDBLite	consensus disorder prediction	439	458	-	-
Amo16g0658	509	PANTHER	SODIUM/HYDROGEN EXCHANGER 2	86	508	-	-
Amo16g0658	509	Pfam	Sodium/hydrogen exchanger family	58	400	IPR006153	GO:0006812\|GO:0015299\|GO:0016021\|GO:0055085
Amo16g0658	509	PANTHER	SODIUM/HYDROGEN EXCHANGER	8	83	IPR018422	GO:0006812\|GO:0015299\|GO:0016021

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo16g0658	Amo-Chr16	10717672	10722667	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo16g0658	7	506	Antiporters	AT3G05030	60.688	0.0	651

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo16g0658	-		-	aip:107645855	758.829

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo16g0658	16	10717672	10722667	Amo16g0658	16	10717672	10722667	ECH

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