Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0566 ATGCAGGTTCCTAAATTCTTTTTCTTCAAGGTTTCAATGCTAATAATTGGTCTTACAAGTGTTTGTAAATGCGAGGATTGTAGGAAACCACCGAAGACGATTACTGTTAGTCAATCAGGAAATGCAAACTTCAAAACAGTTCAAAGTGCCATTGATTCTGTCCCCTCAGGAAACTCTCAATGGGTTCATATCCAAATTTCCCCAGGCGTTTACAGAGAAAAGGTGGTAATTGAGAGCGACAAACCTTGCATATATCTTAAAGGAGGCGGCGGGGGTTCCACCAGTATTGAATGGAATGACCACGGCAATGCACATTTCACTGCTACTTTCAACATTAAAGCATCTAACATTGTTGCAAACGCCATTGCCTTCAAGAACACATATAACACTGTAGACACAGGCAAGGTGCTTCAAGCAGTAGCAGCAAGGGTTCATGAAGACAAAATTGCTTTCTACGATTGTGAATTTATAGGGGTACAAGATACCCTGTTCGATTCATATGGCCGCCATTACTATAAGGGTTGTTACATTCAGGGTGGAGTTGACTTCATCTTTGGGAGTGCTCAATCAATGTTTGAGGGAAGCACGCTATTTTTCTCAATGGGACTTGGTCCCAAAGTAGATGGGGTTTTCACAGCAAGCGAAAGGGAAGAAGATGACAACAGCGGCTATGTGTTTAAGAATTGCAACATAACTGGAACTGGAGGAAAAGCCATTCTTGGAAGATCTTTGAATGCTTATGGCAGAGTTATTGTTGCCAATTCTGTGCTTTCAGATGTCGTTAGACCCGAAGGTTGGGAATCTTTGCACCACAATGGAAACGCAGGACCAGGAGCAAACACATCGCATCGTGTGCCATGGACGAAACATCTAAGCGCCTCTGGCCTTCATCAATTCTTGGACATGTCTTTTATTGACAAAGAAGGCTGGATTGCTAATATTCCCTCGTTATGA 954 0.4256 MQVPKFFFFKVSMLIIGLTSVCKCEDCRKPPKTITVSQSGNANFKTVQSAIDSVPSGNSQWVHIQISPGVYREKVVIESDKPCIYLKGGGGGSTSIEWNDHGNAHFTATFNIKASNIVANAIAFKNTYNTVDTGKVLQAVAARVHEDKIAFYDCEFIGVQDTLFDSYGRHYYKGCYIQGGVDFIFGSAQSMFEGSTLFFSMGLGPKVDGVFTASEREEDDNSGYVFKNCNITGTGGKAILGRSLNAYGRVIVANSVLSDVVRPEGWESLHHNGNAGPGANTSHRVPWTKHLSASGLHQFLDMSFIDKEGWIANIPSL* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0566 317 PANTHER PECTINESTERASE 7 316 - -
Amo16g0566 317 Gene3D - 28 316 IPR012334 -
Amo16g0566 317 Pfam Pectinesterase 34 306 IPR000070 GO:0030599|GO:0042545
Amo16g0566 317 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 7 316 - -
Amo16g0566 317 SUPERFAMILY Pectin lyase-like 30 312 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0566 Amo-Chr16 9100714 9105153 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0566 6 274 Carbohydrate Esterase AT2G19150 45.091 4.88e-69 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0566 - - adu:107492287 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0566 16 9100714 9105153 Amo16g0566 16 9100714 9105153 ECH