Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0502 ATGACCAACTTGTACACGTGTCTCGATGGCTTCGCTTACTGCAAGGGGAGTCACGTGAGGGAAAGGTACCTGCAGGACAAGTTGTTTCAGATTTCTAATCATGTTAGTAACTCCCTCGCCATGCTCAAGAAGGTTCCCGGAGTGAAGAAGCCTTCCAAATCGGAGGTCTTCCCGGAATATGGGAAGATGAAGGGACATTTTCCCACCTGGATTACTAACAAAGACCGCAAGCTGCTTCAAGCTTCTGTGAATCAGACTAAGTTCAATCTTGTTGTGGCCCAAGATGGCACTGGAAACTTCAAAACTATAGCGGAGGCGCTGGCTGCTGCTCCCAACTCGAGCACAACCAGGTTTGTGATACACATAAAAGCTGGAGCGTATTTTGAGAACGTGGAGGTGATTAAGAAGAAGACGAATTTGATGCTGGTGGGTGATGGAATCGGAAAAACCGTCGTGAAGGCCAGTAGGAATGTCGTCGACGGCTGGACCACTTTCCAGTTCGCTACTTTTGCTGTAGTAGGAGACGGATTCATAGCAAAAGGCATAACCTTTGAGAACTCGGCGGGACCCCGCAAGCACCAGGCCGTGGCCGTAAGAAACGGTGCAGATCTCTCAGTATTGTACCAATGCAGTTTCGTGGCATACCAAGACACCCTGTACGTCCATTCCCTACGCCAATTCTACCGTGACTGCGACGTATACGGCACCGTAGACTTCATCTTCGGCAACGCCGCCGTCGTCTTCCAAAACTGCAACCTATATGCACGTAAGCCCGATCCAAACCAAAAGAACCTCTTCACCGCACAGGGCAGAGAAGACCCCAACCAGAACACGGGAATATCAATCTTGAACTGCAAGGTTACAGCCGCATCGGATCTAATCCCGGTGAAGTCGTCGTTCAAGACTTACCTTGGTAGGCCATGGAAGCTGTATTCAAGAACAGTTTTTATGAAATCATTCATTGACGATCTGGTTGACCCTGCGGGGTGGTTGGAGTGGAATGGAACCTTTGCGTTGGACACGTTGTATTATGGTGAGTACCAAAATAGGGGTCCTGGTTCGAACACAAGCGCTAGGTTGTTGAGATGTAAGTAA 1095 0.4913 MTNLYTCLDGFAYCKGSHVRERYLQDKLFQISNHVSNSLAMLKKVPGVKKPSKSEVFPEYGKMKGHFPTWITNKDRKLLQASVNQTKFNLVVAQDGTGNFKTIAEALAAAPNSSTTRFVIHIKAGAYFENVEVIKKKTNLMLVGDGIGKTVVKASRNVVDGWTTFQFATFAVVGDGFIAKGITFENSAGPRKHQAVAVRNGADLSVLYQCSFVAYQDTLYVHSLRQFYRDCDVYGTVDFIFGNAAVVFQNCNLYARKPDPNQKNLFTAQGREDPNQNTGISILNCKVTAASDLIPVKSSFKTYLGRPWKLYSRTVFMKSFIDDLVDPAGWLEWNGTFALDTLYYGEYQNRGPGSNTSARLLRCK* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0502 364 PANTHER PECTINESTERASE 1 360 - -
Amo16g0502 364 PANTHER PECTINESTERASE 1 360 - -
Amo16g0502 364 ProSitePatterns Pectinesterase signature 2. 233 242 IPR033131 -
Amo16g0502 364 Pfam Pectinesterase 89 360 IPR000070 GO:0030599|GO:0042545
Amo16g0502 364 Gene3D - 83 363 IPR012334 -
Amo16g0502 364 SUPERFAMILY Pectin lyase-like 86 360 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0502 Amo-Chr16 8305308 8309466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0502 1 360 Carbohydrate Esterase AT4G02320 60.377 6.61e-165 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0502 K01051 - jre:108994228 609.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3145 12 120055880 120062826 Amo16g0502 16 8305308 8309466 PCT