Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0497 ATGGTCATAATATCACGCCTTATGTTACCCCATGCATTATTATTATTGTTCCTTTCATCATTCCTAGCAAGCAGTGGCCAAATGGTGGTTGCAAAAGGGAACAAAAATGGTTATGTTAGAGAAGCTTGCAGTGTAACAAGGTACCAAGACTTGTGTGTTCATTCACTAGCACAATTCTCCAACACTGCGGGAACAAGTCCTAGCAAATGGGCACGTGCTGGGGTATCAGTGACAATAGGCGAGGTAAAGAAAGTTCGAGCATACTTGGCACAGTTGAAAAGAAACGGAGGATTCATAGGAAGAAACAGAGCTGCACTTTCAGATTGTGCTGAGGTTTTTGATGATGCACTTGATGAGCTTCATAGATCACTTGATGTGCTAAGAAAGCTTAGCAAAACCACGTTTAGCACACAAATGGGGGATCTTAATACGTGGATTAGCGCCGCGCTAACCGATGAAGACACTTGCCTTGATGGATTTTCATTTCAAGTCCAAGATGATAATAATAATAATAATCATAACAATAATAAGAAGAAGCAGATCAAGTTGCTGCAGAGGAGGGTCCAGAATGTTTCTTACATAACCAGCAATGCTCTAGCTCTTGTTAACAAGCTTGCTACCACAGGTATTGGAAGCTTTGAACAAGACAAGTCCTGA 657 0.4125 MVIISRLMLPHALLLLFLSSFLASSGQMVVAKGNKNGYVREACSVTRYQDLCVHSLAQFSNTAGTSPSKWARAGVSVTIGEVKKVRAYLAQLKRNGGFIGRNRAALSDCAEVFDDALDELHRSLDVLRKLSKTTFSTQMGDLNTWISAALTDEDTCLDGFSFQVQDDNNNNNHNNNKKKQIKLLQRRVQNVSYITSNALALVNKLATTGIGSFEQDKS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0497 218 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 205 IPR035513 -
Amo16g0497 218 PANTHER PECTINESTERASE INHIBITOR-LIKE 22 200 - -
Amo16g0497 218 CDD PMEI-like_3 42 207 - -
Amo16g0497 218 Pfam Plant invertase/pectin methylesterase inhibitor 39 201 IPR006501 GO:0004857
Amo16g0497 218 SMART PMEI_2 34 201 IPR006501 GO:0004857
Amo16g0497 218 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 207 IPR035513 -
Amo16g0497 218 TIGRFAM PME_inhib: pectinesterase inhibitor domain 9 205 IPR006501 GO:0004857
Amo16g0497 218 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 22 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0497 Amo-Chr16 8228477 8229773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0497 39 215 Carbohydrate Esterase AT3G14310 35.196 7.05e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0497 - - adu:107492431 363.229