Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0483 ATGCCTAGAGCTTTGCTGTTCATGATTCCCCGCATTTGGAGCTTTGTTGTTCGCAATTCACTAAGCTTGGAGTTAGGGGTGGCAACATGCACTCTACTCGCGGATACCCAACTCGACTCCATTCGATTGGGTAGGGTGTGTGTTGAGCCTCAACTCTACTCGACCAACCCGCACCCTATACACGTAGGTGAAAGCTGTGTTGGGGTCAGTGTGAAGCTTCGTTTGGTCGACCTGCACGGAGATGATGGTCCACGGTGGAGGAGAACGCAGGATTTAACGGCGCGGAAGCACAGATCGAGATCTGGCCGTCTTGAGGTTCACACTAAGGGAAGGGAATTGACCACACACGACAACGAGATTCATAGGTACGCTTTCTCTGTGTCATTGAGTTATTTACCGTCCGATAATGTCGGGGGAGGTATGCGCAGAAATATATTTCAATTGGGGGTCGTGCCTCCCGTGTCCCCAACATCGAATGGATTTGTGGAGCGAAACTATGAGTTTTCATATAATTTTGACCGAGTACATGCATCGCAGAATGCGGATGATGGGATGAGCGACAAAACCGTGCCGGTAGAGGAAGTAGAAGCGATATGCAGAGCAGCAGTGAGGATTGTTGACGGGATAGGGTCCTTCGGTGCAATTGAATTTTCTTCCCTGACAGTCAAGGACGTCCTTACGACGGAGTTCACAAGCCTACAGGCAGCTTATGACTACTACAACGAATACGGTCGCAGCAAGGGATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGGGGCGGAGGGCGAAATCATTTGGCAGATATTTGTGTGCTCGAGGGAAGGAGAGCGAGACGGAAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGCCCACGTTGATGATGCCAGCGGGCAATGGTTTGTTGAACAATTCTGCGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTGATTTGCACCAAATCAATTCCATGAGAAAATCTGGGTTGCGGGTGCCGACAATTTTCCGCGCCTTTGCCAATCAGTCAGGGGGATTCGAGACTGTTGGGTTCGAGATAAAGGATTATATATAA 1137 0.5066 MPRALLFMIPRIWSFVVRNSLSLELGVATCTLLADTQLDSIRLGRVCVEPQLYSTNPHPIHVGESCVGVSVKLRLVDLHGDDGPRWRRTQDLTARKHRSRSGRLEVHTKGRELTTHDNEIHRYAFSVSLSYLPSDNVGGGMRRNIFQLGVVPPVSPTSNGFVERNYEFSYNFDRVHASQNADDGMSDKTVPVEEVEAICRAAVRIVDGIGSFGAIEFSSLTVKDVLTTEFTSLQAAYDYYNEYGRSKGFSVRRSKVGRRTKQGAEGEIIWQIFVCSREGERDGKHMQREDRKMDPRPITRCGCEARIKAHVDDASGQWFVEQFCDNHNHPMLDARFRGDLHQINSMRKSGLRVPTIFRAFANQSGGFETVGFEIKDYI* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0483 378 Pfam FAR1 DNA-binding domain 238 332 IPR004330 -
Amo16g0483 378 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 206 334 - -
Amo16g0483 378 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 206 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0483 Amo-Chr16 8101994 8104600 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g0483 FAR1 1.4e-20 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0483 - - aip:107633138 390.578