Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0480 ATGTATATAGCTCCCTATATAAGGAACCCAACTATACCCCATGAATCTCACCCCAAATATCCATATCCACGTTCACATAATTCGCATTATATTCTTCTAGCATTTTCTTTGCTTCCAATTATACCAATGGAATTATCATTATTCAAGAATAATAATAACACATTGTACCCTCTTATTAGAATTTATGTTTTCCTATTTCAGCTTTCTTTGTTTGCATCCTTGTCCATAGCAGCATATAAAAATGGAGCTTATGTTCCAACAGAAACGGTTTGCAACTCCACCATGTACCCTTCTTACTGCAAATCAGTTCTTGCTAATCAAAACGGCAATATCTATGACTATTGCCGCGTTTCAGTTAAAAAATCTTTATCGCAATCTAGAAAGTTCTTGAACGCCGTCAACTCTTATCTTCAACAAGGTGGAAATTCTTACTCTCAAACCACAATCCGCGCTCTCCAAGATTGCAAATTCCTCGCCGAACTCAACTTGGAGTTCTTGTCAAACACTCTTGACACGGTTCAAAAAGCCGGTGATGTTCTTCCCGCCGGTGAAGCTGATGATTATCACACAGTGCTCAGTGCCGTTTTGACAAACCAACAAACATGTTTGGGTGGATTGCAAACCACGGCTTCTGATCAGAGAGTCAAAGATGAACTTTCTTCTCTGCTCTCAGAGGATACAAAGCTTAACAGCGTCTCTCTTGCTATGTTCGTTGATGCTTGGATTCCTCAGGAGCAAACTACATCGTGGGAAGAAGAAAGTCATGGCCAGCGTGGCAGAAAACTACTAAGCTTGGAAGACATGGAAGATGTTTCTGTGAAAGATATTGTGGTTGTTAGTAAGGATGGAAGTGGAAACTTCACCACTATCAATGAAGCTATAAAGGCTGCACCCAATAACTCGGTTGCTACCGATGGCTATTTCGTCGTCTTCATCACCGAGGGTGTGTATGAAGAGTACGTATCTATAGACAAGAAGAAGAAGTACTTGATGCTGATTGGAGATGGAATCAATCGGACAGTTATCACTGGTGATCACAATGTTGTTGATGGTTTCACAACCTTCAACTCAGCAACATTTGCTGTGGTGGCGGAAGGATTTGTAGCAGTCAACATAACATTCCGCAACAGTGCGGGACCAAGCAAGCACCAAGCAGTGGCAGTGAGAAATGGAGCAGATTTGTCCACCTTCTATGGCTGCAGCTTTGAAGGTTACCAAGACACTCTGTACACACATTCCATGAGGCAATTCTACCGTGAATGCGATGTTTACGGCACAGTTGACTTTATATTTGGAAATGCAGCGGTTGTTTTACAAAACTGCAACTTATATCCCCGCCTTCCAATGAGTGGACAATTCAATGCCATCACGGCTCAAGGCCGAACCGATCCGAACCAAAACACTGGCATTTCCATACAGAACGCAACCATTAAAGCCGCCGACGATTTGGCTCCAGTGGTTGGTAGTGTGTCAACCTACCTTGGGAGGCCGTGGAAGGAGTACTCAAGGACAATTTATATTCAGAGTTTTATGGATAGTTTGATAGCTCCAGTTGGGTGGAGTAATTGGAATGGAGATTTTGCACTCAGCACTTTGTACTATGCTGAGTACAATAACATGGGACCTGGTTCAAGCACTGCTAATAGAGTGAATTGGCCTGGCTATCATGTTATCAATGATATTGATGCAGCTAATTTTACTGTCTCCAAATTCTTGGATGGGGATGCTTGGTTGCCTCCCACTAACGTTCCATTCCAGACATCACTGTAA 1770 0.4249 MYIAPYIRNPTIPHESHPKYPYPRSHNSHYILLAFSLLPIIPMELSLFKNNNNTLYPLIRIYVFLFQLSLFASLSIAAYKNGAYVPTETVCNSTMYPSYCKSVLANQNGNIYDYCRVSVKKSLSQSRKFLNAVNSYLQQGGNSYSQTTIRALQDCKFLAELNLEFLSNTLDTVQKAGDVLPAGEADDYHTVLSAVLTNQQTCLGGLQTTASDQRVKDELSSLLSEDTKLNSVSLAMFVDAWIPQEQTTSWEEESHGQRGRKLLSLEDMEDVSVKDIVVVSKDGSGNFTTINEAIKAAPNNSVATDGYFVVFITEGVYEEYVSIDKKKKYLMLIGDGINRTVITGDHNVVDGFTTFNSATFAVVAEGFVAVNITFRNSAGPSKHQAVAVRNGADLSTFYGCSFEGYQDTLYTHSMRQFYRECDVYGTVDFIFGNAAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIQNATIKAADDLAPVVGSVSTYLGRPWKEYSRTIYIQSFMDSLIAPVGWSNWNGDFALSTLYYAEYNNMGPGSSTANRVNWPGYHVINDIDAANFTVSKFLDGDAWLPPTNVPFQTSL* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0480 589 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 70 588 - -
Amo16g0480 589 PANTHER PECTINESTERASE 70 588 - -
Amo16g0480 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 89 237 IPR035513 -
Amo16g0480 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 87 238 IPR035513 -
Amo16g0480 589 Pfam Plant invertase/pectin methylesterase inhibitor 88 236 IPR006501 GO:0004857
Amo16g0480 589 CDD PMEI-like_3 89 237 - -
Amo16g0480 589 SUPERFAMILY Pectin lyase-like 274 586 IPR011050 -
Amo16g0480 589 ProSitePatterns Pectinesterase signature 2. 423 432 IPR033131 -
Amo16g0480 589 Gene3D - 270 589 IPR012334 -
Amo16g0480 589 Pfam Pectinesterase 277 575 IPR000070 GO:0030599|GO:0042545
Amo16g0480 589 SMART PMEI_2 80 236 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0480 Amo-Chr16 8062776 8064920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0480 65 589 Carbohydrate Esterase AT4G02330 54.417 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0480 K01051 - gmx:100792847 796.578